Mycobacterium phage TyDawg
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Detailed Information for Phage TyDawg
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTylea Hernandez
Year Found2018
Location FoundDahlonga, GA USA
Finding InstitutionUniversity of North Georgia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates34.527222 N, 83.986944 W Map
Discovery NotesThe sample was collected from soil growing greenery in front of one of the campus dorms. It was a clear, sunny, hot day, and the soil was moist.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage128
Genome length (bp)81039
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACCTCCTGCAA
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterM
SubclusterM1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesPlaque size began at 4 mm, but began to show smaller plaques with 4 mm being the largest. Plaques are clear and lytic.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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TyDawg_1

TyDawg_2

TyDawg_3
(Lsr2-like DNA bridging protein)

TyDawg_4

TyDawg_5

TyDawg_6

TyDawg_7

TyDawg_8

TyDawg_9

TyDawg_10

TyDawg_11

TyDawg_12

TyDawg_13
(terminase small subunit)

TyDawg_14
(terminase large subunit)

TyDawg_15
(portal protein)

TyDawg_16
(MuF-like minor capsid protein)

TyDawg_17
(scaffolding protein)

TyDawg_18
(major capsid protein)

TyDawg_19
(head-to-tail adaptor)

TyDawg_20
(head-to-tail stopper)

TyDawg_21

TyDawg_22
(tail terminator)

TyDawg_23
(major tail protein)

TyDawg_24
(tail assembly chaperone)

TyDawg_25
(tail assembly chaperone)

TyDawg_26
(tape measure protein)

TyDawg_27
(minor tail protein)

TyDawg_28
(minor tail protein)

TyDawg_29
(minor tail protein)

TyDawg_30
(minor tail protein)

TyDawg_31
(minor tail protein)

TyDawg_32

TyDawg_33

TyDawg_34

TyDawg_35
(lysin A)

TyDawg_36

TyDawg_37
(holin)

TyDawg_38
(lysin B)

TyDawg_39
(NrdH-like glutaredoxin)

TyDawg_40

TyDawg_41

TyDawg_42

TyDawg_43

TyDawg_44

TyDawg_45

TyDawg_46

TyDawg_47

TyDawg_48

TyDawg_49

TyDawg_50

TyDawg_51

TyDawg_52

TyDawg_53

TyDawg_54
(ERF family ssDNA binding protein)

TyDawg_55

TyDawg_56
(Cas4 family exonuclease)

TyDawg_57

TyDawg_58
(ClpP-like protease)

TyDawg_59

TyDawg_60

TyDawg_61

TyDawg_62

TyDawg_63

TyDawg_64

TyDawg_65

TyDawg_66

TyDawg_67

TyDawg_68
(ssDNA binding protein)

TyDawg_69
(DnaB-like dsDNA helicase)

TyDawg_70
(WhiB family transcription factor)

TyDawg_71
(holliday junction resolvase)

TyDawg_72
(WhiB family transcription factor)

TyDawg_73

TyDawg_74

TyDawg_75

TyDawg_76

TyDawg_77
(endonuclease VII)

TyDawg_78

TyDawg_79
(DnaQ-like DNA polymerase III subunit)

TyDawg_80

TyDawg_81

TyDawg_82
(HNH endonuclease)

TyDawg_83
(PTPc tyrosine phosphatase)

TyDawg_84

TyDawg_85

TyDawg_86

TyDawg_87

TyDawg_88

TyDawg_89
(HNH endonuclease)

TyDawg_90

TyDawg_93

TyDawg_98

TyDawg_103
(ribonucleotide reductase)

TyDawg_110
(RtcB-like RNA ligase)

TyDawg_111

TyDawg_112
(MazG-like nucleotide pyrophosphohydrolase)

TyDawg_113

TyDawg_114

TyDawg_115

TyDawg_116

TyDawg_117

TyDawg_118

TyDawg_119
(DprA-like DNA processing chain A)

TyDawg_120

TyDawg_121
(metallophosphoesterase)

TyDawg_122

TyDawg_123

TyDawg_124

TyDawg_125

TyDawg_126
(serine integrase)

TyDawg_127

TyDawg_128

TyDawg_129

TyDawg_130

TyDawg_131

TyDawg_132

TyDawg_133

TyDawg_134

TyDawg_135

TyDawg_136

TyDawg_137

TyDawg_138

TyDawg_139

TyDawg_140

TyDawg_141

TyDawg_142

TyDawg_143

TyDawg_144

TyDawg_145

TyDawg_146

TyDawg_147

TyDawg_148

TyDawg_149

TyDawg_150

TyDawg_151

TyDawg_152

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586024
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5x10e9
Pitt Freezer Box# 74
Pitt Freezer Box Grid# H1
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload