| Detailed Information for Phage BirthdayBoy |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Julia Anderson |
| Year Found | 2022 |
| Location Found | Fairfax, VA United States |
| Finding Institution | George Mason University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.829023 N, 77.306986 W Map |
| Discovery Notes | The soil was collected from a regular composting site on the morning of September 9th, 2022. The temperature was 65 degrees Fahrenheit and the weather was cloudy, having rained recently. Its texture was partially sandy, consisting mostly of organic matter, and it was damp. The sample was taken within an inch of the surface. |
| Naming Notes | I received a positive result from my spot test a week after collection, which so happened to be on my birthday! This sample was my third try at isolating a phage, so I was hopeful that it would be the charm. I was so thankful that a sample finally gave a positive. It was the universe's birthday present to me! |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 23, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 873 |
| Genome length (bp) | 67633 |
| Character of genome ends | Circularly Permuted |
| GC Content | 58.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DV |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | George Mason University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques were small and temperate with no halos. |
| Morphotype | Siphoviridae |
| Number of Genes | 99 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OR475261 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
161 |
| Pitt Freezer Box Grid# |
D7 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
