| Detailed Information for Phage DrGrey | |
| Discovery Information | |
| Isolation Host | Streptomyces griseus ATCC 10137 |
| Found By | Meredith Shaffer |
| Year Found | 2016 |
| Location Found | Denton, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.212584 N, 97.14542 W Map |
| Discovery Notes | I gathered the dirt from near the RTFP building on the UNT campus. The dirt was moist and cool with plant particles in it when collected. It was collected at 4:10pm at 18 degrees Celsius. |
| Naming Notes | I named this phage after my favorite character in the show Grey's Anatomy. As well, Dr. Grey is one of my nicknames because I am obsessed with the show and I want to become a surgeon when I am older. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 12, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 4377 |
| Genome length (bp) | 56076 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCCGCCT |
| GC Content | 59.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BI |
| Subcluster | BI1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewCherryBlossom (BI1) DrGrey (BI1) Esketit (BI1) FidgetOrca (BI1) FrodoSwaggins (BI1) GirlPower (BI1) HazuAndZazu (BI1) Hoshi (BI1) IceWarrior (BI1) Indigenous (BI1) Jaylociraptor (BI1) Madamato (BI1) Maya (BI1) Meibysrarus (BI1) Namo (BI1) OlympicHelado (BI1) Popy (BI1) Rima (BI1) Soshi (BI1) Spectropatronm (BI1) TaidaOne (BI1) TieDye (BI1) TonyStarch (BI1) Annihilus (BI2) Bilo (BI2) Doxi13 (BI2) GoblinVoyage (BI2) HotFries (BI2) Moozy (BI2) PherryCruz (BI2) RavenPuff (BI2) RosaAsantewaa (BI2) Scap1 (BI2) SheRa (BI2) LibertyBell (BI3) CricKo (BI4) FromIndy (BI4) Miek (BI4) Rainydai (BI4) Regigigas (BI4) SendItCS (BI4) Thiqqums (BI4) Bing (BI5) Kardashian (BI6) ClubPenguin (BI7) |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are circular, clear, and measure to be about 1.6mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 82 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDrGrey_1 DrGrey_2 DrGrey_3 DrGrey_4 DrGrey_5 DrGrey_6 DrGrey_7 DrGrey_8 DrGrey_9 DrGrey_10 DrGrey_11 DrGrey_12 DrGrey_13 DrGrey_14 DrGrey_15 DrGrey_16 DrGrey_17 DrGrey_18 DrGrey_19 DrGrey_20 DrGrey_21 DrGrey_22 DrGrey_23 DrGrey_24 DrGrey_25 DrGrey_26 DrGrey_27 DrGrey_28 DrGrey_29 DrGrey_30 DrGrey_31 DrGrey_32 DrGrey_33 DrGrey_34 DrGrey_35 DrGrey_36 DrGrey_37 DrGrey_38 DrGrey_39 DrGrey_40 DrGrey_41 DrGrey_42 DrGrey_43 DrGrey_44 DrGrey_45 DrGrey_46 DrGrey_47 DrGrey_48 DrGrey_49 DrGrey_50 DrGrey_51 DrGrey_52 DrGrey_53 DrGrey_54 DrGrey_55 DrGrey_56 DrGrey_57 DrGrey_58 DrGrey_59 DrGrey_60 DrGrey_61 DrGrey_62 DrGrey_63 DrGrey_64 DrGrey_65 DrGrey_66 DrGrey_67 DrGrey_68 DrGrey_69 DrGrey_70 DrGrey_71 DrGrey_72 DrGrey_73 DrGrey_74 DrGrey_75 DrGrey_76 DrGrey_77 DrGrey_78 DrGrey_79 DrGrey_80 DrGrey_81 DrGrey_82 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MF467948 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.8x10^10 pfu/mL |
| Pitt Freezer Box# | 36 |
| Pitt Freezer Box Grid# | E3 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
