Gordonia phage DumpTruck
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Detailed Information for Phage DumpTruck
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByAubree Caudill, Zoe Howard
Year Found2020
Location FoundLakeland, FL USA
Finding InstitutionUniversity of South Florida
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature28°C
GPS Coordinates28.080833 N, 82.076667 W Map
Discovery Notesrained the night before collection, in an area with lots of horse traffic
Naming Notesdumptrucks are cool
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 22, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage830
Genome length (bp)67754
Character of genome endsCircularly Permuted
GC Content57.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque Notessmall, temperate plaques; slow growing
Number of Genes100
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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DumpTruck_1

DumpTruck_2
(terminase)

DumpTruck_3
(portal protein)

DumpTruck_4
(esterase)

DumpTruck_5

DumpTruck_6

DumpTruck_7

DumpTruck_8

DumpTruck_9

DumpTruck_10
(metalloprotease)

DumpTruck_11
(MuF-like minor capsid protein)

DumpTruck_12

DumpTruck_13
(minor capsid protein)

DumpTruck_14
(major capsid protein)

DumpTruck_15

DumpTruck_16

DumpTruck_17

DumpTruck_18
(head-to-tail stopper)

DumpTruck_19

DumpTruck_20
(tail terminator)

DumpTruck_21

DumpTruck_22

DumpTruck_23
(major tail protein)

DumpTruck_24
(tail assembly chaperone)

DumpTruck_25

DumpTruck_26
(tape measure protein)

DumpTruck_27
(minor tail protein)

DumpTruck_28
(minor tail protein)

DumpTruck_29
(minor tail protein)

DumpTruck_30

DumpTruck_31

DumpTruck_32
(lysin A)

DumpTruck_33

DumpTruck_34

DumpTruck_35

DumpTruck_36

DumpTruck_37

DumpTruck_38

DumpTruck_39

DumpTruck_40

DumpTruck_41

DumpTruck_42

DumpTruck_43

DumpTruck_44

DumpTruck_45

DumpTruck_46

DumpTruck_47

DumpTruck_48

DumpTruck_49

DumpTruck_50

DumpTruck_51

DumpTruck_52

DumpTruck_53

DumpTruck_54

DumpTruck_55

DumpTruck_56

DumpTruck_57

DumpTruck_58
(DNA helicase)

DumpTruck_59

DumpTruck_60

DumpTruck_61

DumpTruck_62

DumpTruck_63

DumpTruck_64
(Cas4 family exonuclease)

DumpTruck_65

DumpTruck_66
(RecA-like DNA recombinase)

DumpTruck_67

DumpTruck_68

DumpTruck_69
(oxidoreductase)

DumpTruck_70
(nucleotide pyrophosphohydrolase)

DumpTruck_71

DumpTruck_72

DumpTruck_73
(methyltransferase)

DumpTruck_74

DumpTruck_75

DumpTruck_76
(oxidoreductase)

DumpTruck_77

DumpTruck_78

DumpTruck_79

DumpTruck_80
(DnaE-like DNA polymerase III)

DumpTruck_81
(MazG-like nucleotide pyrophosphohydrolase)

DumpTruck_82

DumpTruck_83

DumpTruck_84
(ThyX-like thymidylate synthase)

DumpTruck_85

DumpTruck_86

DumpTruck_87

DumpTruck_88
(RuvC-like resolvase)

DumpTruck_89
(lysin B)

DumpTruck_90

DumpTruck_91
(DNA primase/polymerase)

DumpTruck_92

DumpTruck_93

DumpTruck_94

DumpTruck_95

DumpTruck_96

DumpTruck_97

DumpTruck_98

DumpTruck_99

DumpTruck_100

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ005671
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 118
Pitt Freezer Box Grid# F2
Available Files
EM PictureDownload
GenBank File for PhameratorDownload