Detailed Information for Phage FreakyGoo |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Gracie Gonzalez, Abbie Smith |
Year Found | 2024 |
Location Found | Blacksburg, VA United States |
Finding Institution | Virginia Tech |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 37.247028 N, 80.419889 W Map |
Discovery Notes | Discovered from an enriched isolation of peat soil, found in moist conditions due to rain the previous evening. |
Naming Notes | Named due to a joke about all the miscellaneous liquids we worked with in order to isolate the phage. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 15, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2665 |
Genome length (bp) | 81298 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | ACCTCCTGCAA |
GC Content | 61.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | M |
Subcluster | M1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Virginia Tech |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | Big round plaques. |
Morphotype | Siphoviridae |
Number of Genes | 138 |
Number of tRNAs | 20 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |