Streptomyces phage Indigenous
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Detailed Information for Phage Indigenous | |
Discovery Information | |
Isolation Host | Streptomyces griseus ATCC 10137 |
Former names | Native |
Found By | Ian Alberts |
Year Found | 2018 |
Location Found | Evansville, IN USA |
Finding Institution | University of Evansville |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 37.970761 N, 87.530454 W Map |
Discovery Notes | Found at the University of Evansville Native Plant Garden. |
Naming Notes | Since the phage was isolated from the native plant garden at the University of Evansville, the name had to reference the discovery location. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 20, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1648 |
Genome length (bp) | 56119 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCCGCCT |
GC Content | 59.5% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | BI |
Subcluster | BI1 |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | University of Evansville |
Annotation Status | In GenBank |
Plaque Notes | Small, irregular in shape |
Morphotype | Siphoviridae |
Number of Genes | 88 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MW055905 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 81 |
Pitt Freezer Box Grid# | G5 |
Available Files | |
Plaque Picture | Download |
GenBank File for Phamerator | Download |