Mycobacterium phage LilhomieP
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Detailed Information for Phage LilhomieP
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByClaire Sintek and Christian Rozmiarek
Year Found2015
Location FoundCrete, NE USA
Finding InstitutionDoane University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.622769 N, 96.948115 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage671
Genome length (bp)81071
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACCTCCTGCAA
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterM
SubclusterM1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Alabama at Birmingham
Annotation StatusIn GenBank
Plaque NotesTemperate phage
MorphotypeSiphoviridae
Number of Genes137
Number of tRNAs18
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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LilhomieP_1

LilhomieP_2

LilhomieP_3
(Lsr2-like DNA bridging protein)

LilhomieP_4

LilhomieP_5

LilhomieP_6

LilhomieP_7

LilhomieP_8

LilhomieP_9

LilhomieP_10

LilhomieP_11

LilhomieP_12
(terminase small subunit)

LilhomieP_13
(terminase large subunit)

LilhomieP_14
(portal protein)

LilhomieP_15
(MuF-like minor capsid protein)

LilhomieP_16
(scaffolding protein)

LilhomieP_17
(major capsid protein)

LilhomieP_18
(head-to-tail adaptor)

LilhomieP_19
(head-to-tail stopper)

LilhomieP_20

LilhomieP_21
(tail terminator)

LilhomieP_22
(major tail protein)

LilhomieP_23
(tail assembly chaperone)

LilhomieP_24
(tail assembly chaperone)

LilhomieP_25
(tape measure protein)

LilhomieP_26
(minor tail protein)

LilhomieP_27
(minor tail protein)

LilhomieP_28
(minor tail protein)

LilhomieP_29
(minor tail protein)

LilhomieP_30
(minor tail protein)

LilhomieP_31

LilhomieP_32

LilhomieP_33

LilhomieP_34
(lysin A)

LilhomieP_35

LilhomieP_36
(holin)

LilhomieP_37
(lysin B)

LilhomieP_38
(NrdH-like glutaredoxin)

LilhomieP_39

LilhomieP_40

LilhomieP_41

LilhomieP_42

LilhomieP_43

LilhomieP_44

LilhomieP_45

LilhomieP_46
(nucleotidyltransferase)

LilhomieP_47

LilhomieP_48

LilhomieP_49

LilhomieP_50

LilhomieP_51

LilhomieP_52

LilhomieP_53
(ERF family ssDNA binding protein)

LilhomieP_54

LilhomieP_55

LilhomieP_56

LilhomieP_57
(ClpP-like protease)

LilhomieP_58

LilhomieP_59

LilhomieP_60

LilhomieP_61

LilhomieP_62

LilhomieP_63

LilhomieP_64

LilhomieP_65

LilhomieP_66
(ssDNA binding protein)

LilhomieP_67

LilhomieP_68

LilhomieP_69
(DnaB-like dsDNA helicase)

LilhomieP_70
(WhiB family transcription factor)

LilhomieP_71
(holliday junction resolvase)

LilhomieP_72
(WhiB family transcription factor)

LilhomieP_73

LilhomieP_74

LilhomieP_75

LilhomieP_76

LilhomieP_77
(endonuclease VII)

LilhomieP_78

LilhomieP_79
(DnaQ-like DNA polymerase III subunit)

LilhomieP_80

LilhomieP_81

LilhomieP_82
(HNH endonuclease)

LilhomieP_83
(PTPc tyrosine phosphatase)

LilhomieP_84

LilhomieP_85

LilhomieP_86

LilhomieP_87

LilhomieP_88

LilhomieP_89
(HNH endonuclease)

LilhomieP_90

LilhomieP_91 — tRNA
(codon recognized: UGG)

LilhomieP_92 — tRNA
(codon recognized: AAC)

LilhomieP_93

LilhomieP_94 — tRNA
(codon recognized: UAC)

LilhomieP_95 — tRNA
(codon recognized: CAG)

LilhomieP_96 — tRNA
(codon recognized: CCA)

LilhomieP_97
(HNH endonuclease)

LilhomieP_98 — tRNA
(codon recognized: AGC)

LilhomieP_99 — tRNA
(codon recognized: UUC)

LilhomieP_100 — tRNA
(codon recognized: AUG)

LilhomieP_101

LilhomieP_102 — tRNA
(codon recognized: CGU)

LilhomieP_103 — tRNA
(codon recognized: CAC)

LilhomieP_104 — tRNA
(codon recognized: UGC)

LilhomieP_105

LilhomieP_106 — tRNA
(codon recognized: CUG)

LilhomieP_107
(ribonucleotide reductase)

LilhomieP_108 — tRNA
(codon recognized: AAG)

LilhomieP_109 — tRNA
(codon recognized: GGA)

LilhomieP_110 — tRNA
(codon recognized: GUA)

LilhomieP_111 — tRNA
(codon recognized: ACU)

LilhomieP_112 — tRNA
(codon recognized: GAC)

LilhomieP_113
(HNH endonuclease)

LilhomieP_114 — tRNA
(codon recognized: GAG)

LilhomieP_115
(RtcB-like RNA ligase)

LilhomieP_116
(band-7-like membrane protein)

LilhomieP_117
(MazG-like nucleotide pyrophosphohydrolase)

LilhomieP_118

LilhomieP_119

LilhomieP_120

LilhomieP_121

LilhomieP_122

LilhomieP_123

LilhomieP_124
(DprA-like DNA processing chain A)

LilhomieP_125

LilhomieP_126
(metallophosphoesterase)

LilhomieP_127

LilhomieP_128

LilhomieP_129

LilhomieP_130

LilhomieP_131
(serine integrase)

LilhomieP_132

LilhomieP_133

LilhomieP_134

LilhomieP_135

LilhomieP_136

LilhomieP_137

LilhomieP_138

LilhomieP_139

LilhomieP_140

LilhomieP_141

LilhomieP_142

LilhomieP_143

LilhomieP_144

LilhomieP_145

LilhomieP_146

LilhomieP_147

LilhomieP_148

LilhomieP_149

LilhomieP_150

LilhomieP_151

LilhomieP_152

LilhomieP_153

LilhomieP_154

LilhomieP_155

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK937612
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5.28 x 10^6
Date of SEA Lysate Titering Nov 30, 2015
Pitt Freezer Box# 45
Pitt Freezer Box Grid# H12
Available Files
GenBank File for PhameratorDownload