The Actinobacteriophage Database

Mycobacterium phage Marvin

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Detailed Information for Phage Marvin
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Duplicates of this Phage	Skip
Found By	Melissa Phillips
Year Found	2009
Location Found	Radnor, PA USA
Finding Institution	Cabrini University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	No
Isolation Temperature	Not entered
GPS Coordinates	40.087694 N, 75.622308 W Map
Discovery Notes	A garden outside of a dorm rooms.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Mar 17, 2011
Sequencing Facility	Joint Genomics Institute
Shotgun Sequencing Method	Sanger Sequencing
Genome length (bp)	65100
Character of genome ends	3' Sticky Overhang
Overhang Length	11 bases
Overhang Sequence	GCGCGCAGCGC
GC Content	63.4%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	S
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View Beelzebub Blackbeetle Caprice Clarkson Corazon FeliMaine Gattaca Huphlepuff JoieB Lilbit LittleLaf Marvin MosMoris Poise Pringar Raela RedRaider77 Tesla VasuNzinga
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Plaque Notes	Pin point sized plaques, lytic, long incubation time approximately 48 hours.
Morphotype	Siphoviridae
Number of Genes	107
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Marvin_1 Marvin_2 Marvin_3 Marvin_4 Marvin_5 Marvin_6 Marvin_7 Marvin_8 Marvin_9 Marvin_10 Marvin_11 Marvin_12 Marvin_13 Marvin_14 Marvin_15 Marvin_16 Marvin_17 Marvin_18 Marvin_19 Marvin_20 Marvin_21 Marvin_22 Marvin_23 Marvin_24 Marvin_25 Marvin_26 Marvin_27 Marvin_28 Marvin_29 Marvin_30 (DNA methyltransferase) Marvin_31 Marvin_32 Marvin_33 (terminase large subunit) Marvin_34 (portal protein) Marvin_35 Marvin_36 Marvin_37 Marvin_38 (major capsid protein) Marvin_39 Marvin_40 (head-to-tail stopper) Marvin_41 Marvin_42 Marvin_43 Marvin_44 (tail assembly chaperone) Marvin_45 (tail assembly chaperone) Marvin_46 (tape measure protein) Marvin_47 Marvin_48 Marvin_49 Marvin_50 Marvin_51 Marvin_52 Marvin_53 Marvin_54 Marvin_55 Marvin_56 Marvin_57 Marvin_58 Marvin_59 Marvin_60 Marvin_61 (helix-turn-helix DNA binding protein) Marvin_62 Marvin_63 Marvin_64 Marvin_65 Marvin_66 Marvin_67 Marvin_68 Marvin_69 Marvin_70 Marvin_71 Marvin_72 Marvin_73 Marvin_74 Marvin_75 Marvin_76 Marvin_77 Marvin_78 Marvin_79 Marvin_80 Marvin_81 Marvin_82 Marvin_83 Marvin_84 Marvin_85 Marvin_86 Marvin_87 Marvin_88 Marvin_89 Marvin_90 Marvin_91 Marvin_92 Marvin_93 Marvin_94 Marvin_95 Marvin_96 Marvin_97 Marvin_98 Marvin_99 Marvin_100 Marvin_101 Marvin_102 Marvin_103 Marvin_104 Marvin_105 (glutamine amidotransferase domain protein) Marvin_106 (glutamine amidotransferase domain protein) Marvin_107
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	JF704100
Refseq Number	None yet
Published in Paper	Mageeney C, et al. 2012, Journal of Virology: Mycobacteriophage Marvin: a new singleton phage with an unusual genome organization.
Archiving Info
Archiving status	Archived
SEA Lysate Titer	5e9
Pitt Freezer Box#	2
Pitt Freezer Box Grid#	D3
Available Files
Plaque Picture	Download
Restriction Digest Picture	Download
Virtual Digest Picture	Download
EM Picture	Download

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