| Detailed Information for Phage Pabst | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Hunter Chase Bishop |
| Year Found | 2019 |
| Location Found | Cullowhee, NC United States of America |
| Finding Institution | Western Carolina University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 35.309196 N, 83.178029 W Map |
| Discovery Notes | This phage was discovered in a creek that runs between and under Albright and Benton Residence halls at Western Carolina University. The sample was collected in a shallow silty region of the creek. |
| Naming Notes | The phage is named after the American Lager beer Pabst Blue Ribbon. Moreover, the name Pabst is a nickname for my father and what he wants to be called as a grandpa. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 122 |
| Genome length (bp) | 53620 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EK |
| Subcluster | EK1 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to ViewEugeneKrabs (None) KingKamren (None) Zhengyi (None) Alex44 (EK1) ArMaWen (EK1) Biozilla (EK1) Birdfeeder (EK1) BlueRugrat (EK1) Corn21 (EK1) CrunchyBoi (EK1) Dashyla (EK1) DumpQuist (EK1) HitchHiker (EK1) JessellCookie (EK1) LesNorah (EK1) LilyLou (EK1) MiamiPanther (EK1) Oatly (EK1) Pabst (EK1) Phogo (EK1) PineapplePluto (EK1) Stormbreaker (EK1) SwissCheezer (EK1) TinyTimothy (EK1) TownLake (EK1) Unphazed (EK1) Wesak (EK1) Xitlalli (EK1) YellowPanda (EK1) Akoni (EK2) AloeVera (EK2) Ashton (EK2) Astartes (EK2) Atraxi (EK2) Barroma (EK2) Fede (EK2) Fullmetal (EK2) JordanFarm (EK2) Mazun (EK2) Moleficent (EK2) Morrill (EK2) Pharky (EK2) Phedro (EK2) Phractured (EK2) PhriedRice (EK2) RicoCaldo (EK2) StagePhright (EK2) ThirteenKH (EK2) TrippleS (EK2) Truong (EK2) Waterlily (EK2) Yafa (EK2) |
| Annotating Institution | Western Carolina University |
| Annotation Status | In GenBank |
| Plaque Notes | My plaques were very small and would often cluster together giving the appearance of larger plaques than the individual plaques. They averaged 1 mm in diameter. The plaques were best described as "freckle-like". |
| Morphotype | Podoviridae |
| Number of Genes | 55 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPabst_1 Pabst_2 Pabst_3 Pabst_4 Pabst_5 Pabst_6 Pabst_7 Pabst_8 Pabst_9 Pabst_10 Pabst_11 Pabst_12 Pabst_13 Pabst_14 Pabst_15 Pabst_16 Pabst_17 Pabst_18 Pabst_19 Pabst_20 Pabst_21 Pabst_22 Pabst_23 Pabst_24 Pabst_25 Pabst_26 Pabst_27 Pabst_28 Pabst_29 Pabst_30 Pabst_31 Pabst_32 Pabst_33 Pabst_34 Pabst_35 Pabst_36 Pabst_37 Pabst_38 Pabst_39 Pabst_40 Pabst_41 Pabst_42 Pabst_43 Pabst_44 Pabst_45 Pabst_46 Pabst_47 Pabst_48 Pabst_49 Pabst_50 Pabst_51 Pabst_52 Pabst_53 Pabst_54 Pabst_55 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT498064 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2x10^8 PFU/mL |
| Pitt Freezer Box# | 105 |
| Pitt Freezer Box Grid# | F2 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
