Detailed Information for Phage ParvusTarda |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Gaston Sanchez |
Year Found | 2021 |
Location Found | Annandale, VA United States |
Finding Institution | George Mason University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | -1°C |
GPS Coordinates | 38.81615 N, 77.214749 W Map |
Discovery Notes | The soil type collected was wet and full of organic matter. the soil collected was also 4 inches below the surface at an elevation of 100 meters. |
Naming Notes | The Phage was named Parvus Tarda because of how small the plaques were when plated (Parvus). Also, because of how slow the plaques were to form (Tarda). |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 11, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 114 |
Genome length (bp) | 67279 |
Character of genome ends | Circularly Permuted |
GC Content | 58.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DV |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | George Mason University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 98 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP172868 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
130 |
Pitt Freezer Box Grid# |
E6 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |