Gordonia phage Ranch
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Detailed Information for Phage Ranch
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByAshley Divens
Year Found2018
Location FoundIrwin, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.356678 N, 79.701902 W Map
Naming NotesRanch dressing is my favorite salad dressing.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 28, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage875
Genome length (bp)66892
Character of genome endsCircularly Permuted
GC Content58.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Number of Genes101
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Ranch_1

Ranch_2
(terminase)

Ranch_3
(portal protein)

Ranch_4

Ranch_5
(esterase)

Ranch_6

Ranch_7

Ranch_8

Ranch_9

Ranch_10

Ranch_11
(metalloprotease)

Ranch_12
(MuF-like minor capsid protein)

Ranch_13

Ranch_14
(minor capsid protein)

Ranch_15
(major capsid protein)

Ranch_16

Ranch_17

Ranch_18

Ranch_19
(head-to-tail stopper)

Ranch_20

Ranch_21
(tail terminator)

Ranch_22

Ranch_23

Ranch_24
(major tail protein)

Ranch_25

Ranch_26

Ranch_27
(tape measure protein)

Ranch_28
(minor tail protein)

Ranch_29
(minor tail protein)

Ranch_30
(minor tail protein)

Ranch_31

Ranch_32

Ranch_33

Ranch_34

Ranch_35

Ranch_36
(lysin A)

Ranch_37

Ranch_38

Ranch_39

Ranch_40

Ranch_41

Ranch_42

Ranch_43

Ranch_44

Ranch_45

Ranch_46

Ranch_47

Ranch_48

Ranch_49

Ranch_50

Ranch_51

Ranch_52

Ranch_53

Ranch_54

Ranch_55

Ranch_56

Ranch_57

Ranch_58

Ranch_59

Ranch_60
(DNA helicase)

Ranch_61

Ranch_62

Ranch_63

Ranch_64

Ranch_65
(Cas4 family exonuclease)

Ranch_66

Ranch_67
(RecA-like DNA recombinase)

Ranch_68

Ranch_69
(oxidoreductase)

Ranch_70
(nucleotide pyrophosphohydrolase)

Ranch_71

Ranch_72

Ranch_73
(methyltransferase)

Ranch_74

Ranch_75
(oxidoreductase)

Ranch_76

Ranch_77

Ranch_78

Ranch_79
(HNH endonuclease)

Ranch_80
(DnaE-like DNA polymerase III)

Ranch_81
(MazG-like nucleotide pyrophosphohydrolase)

Ranch_82

Ranch_83

Ranch_84
(ThyX-like thymidylate synthase)

Ranch_85
(HNH endonuclease)

Ranch_86

Ranch_87

Ranch_88

Ranch_89
(RuvC-like resolvase)

Ranch_90
(lysin B)

Ranch_91

Ranch_92
(DNA primase/polymerase)

Ranch_93

Ranch_94

Ranch_95

Ranch_96

Ranch_97

Ranch_98

Ranch_99

Ranch_100

Ranch_101

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234207
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 96
Pitt Freezer Box Grid# D7
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload