Discovery Information |
Isolation Host | Streptomyces scabiei RL-34 |
Found By | Burnett,Thomas D & Frank,Danielle |
Year Found | 2017 |
Location Found | Catonsville, MD USA |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 39.281463 N, 76.751965 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 18, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Genome length (bp) | 43709 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCCCT |
GC Content | 60.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BI |
Subcluster | BI2 |
Cluster Life Cycle | Lytic |
Lysogeny Notes | Infects in S. mirabilis and S. neyagawaensis |
Other Cluster Members |
|
Annotating Institution | University of Maryland, Baltimore County |
Annotation Status | In GenBank |
Plaque Notes | 1mm, round, clear after 24hrs at 30C |
Morphotype | Siphoviridae |
Number of Genes | 59 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH155878 |
Refseq Number | None yet |
Published in Paper | Blocker D et al 2018, Genome Announcements: Complete Genome Sequences of Six BI Cluster Streptomyces Bacteriophages, HotFries, Moozy, Rainydai, RavenPuff, Scap1, and SenditCS. |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
5.84 x 10^10 |
Pitt Freezer Box# |
49 |
Pitt Freezer Box Grid# |
G1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |