| Detailed Information for Phage Reindeer |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Anna Fortier & Madi Kritsch |
| Year Found | 2016 |
| Location Found | Longview, TX USA |
| Finding Institution | LeTourneau University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 33°C |
| GPS Coordinates | 32.508239 N, 94.760182 W Map |
| Discovery Notes | The area where we collected soil was off of a public trail found in Longview, Texas. It was a shady area full of green foliage and soil that was slightly moist. We dug approximately 4 inches into the ground to collect the sample. |
| Naming Notes | We named the phage Reindeer because we both love Christmas! We also wanted to spread the holiday cheer by finding phage for all to hear! |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 3, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Genome length (bp) | 82356 |
| Character of genome ends | Unknown |
| Overhang Length | 11 bases |
| Overhang Sequence | ACCTCGTGCAA |
| GC Content | 60.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | M |
| Subcluster | M1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | LeTourneau University |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 140 |
| Number of tRNAs | 19 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT658803 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
59 |
| Pitt Freezer Box Grid# |
A6 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
