| Detailed Information for Phage Rota | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Joaquin S. Torres, Jordyn Barnes, Annelise Green |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 70°C |
| GPS Coordinates | 40.440304 N, 79.965546 W Map |
| Discovery Notes | Found in a backyard! |
| Naming Notes | Named after Joaquin's birth city! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 29, 2026 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 140 |
| Genome length (bp) | 67336 |
| Character of genome ends | Circularly Permuted |
| GC Content | 58.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DV |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to ViewAlephilan Alyssamiracle Apeppi Astralis Avian BirthdayBoy Charminar DaviePasture DoobyDoo DumpTruck Erutan Fulcrum Genamy16 Gibbin GOATification GretelLyn Jalebi Jamemuya19 Lambo LavAbarElk Lila22 LuckyLeo Mima20 MoiGyank NorManre NovaSharks OtterstedtS21 ParvusTarda Patos Ranch RazorC Rota Rukungu Rumi Sadboi Sampudon Stormer Tillicus Wojtek Xenia2 Yikes Zany |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 5/1/2026) |
| Number of Genes | 94 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRota_1 Rota_2 Rota_3 Rota_4 Rota_5 Rota_6 Rota_7 Rota_8 Rota_9 Rota_10 Rota_11 Rota_12 Rota_13 Rota_14 Rota_15 Rota_16 Rota_17 Rota_18 Rota_19 Rota_20 Rota_21 Rota_22 Rota_23 Rota_24 Rota_25 Rota_26 Rota_27 Rota_28 Rota_29 Rota_30 Rota_31 Rota_32 Rota_33 Rota_34 Rota_35 Rota_36 Rota_37 Rota_38 Rota_39 Rota_40 Rota_41 Rota_42 Rota_43 Rota_44 Rota_45 Rota_46 Rota_47 Rota_48 Rota_49 Rota_50 Rota_51 Rota_52 Rota_53 Rota_54 Rota_55 Rota_56 Rota_57 Rota_58 Rota_59 Rota_60 Rota_61 Rota_62 Rota_63 Rota_64 Rota_65 Rota_66 Rota_67 Rota_68 Rota_69 Rota_70 Rota_71 Rota_72 Rota_73 Rota_74 Rota_75 Rota_76 Rota_77 Rota_78 Rota_79 Rota_80 Rota_81 Rota_82 Rota_83 Rota_84 Rota_85 Rota_86 Rota_87 Rota_88 Rota_89 Rota_90 Rota_91 Rota_92 Rota_93 Rota_94 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 214 |
| Pitt Freezer Box Grid# | D7 |