Mycobacterium phage ShrimpFriedEgg
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Detailed Information for Phage ShrimpFriedEgg
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLonghui Gao
Year Found2018
Location FoundBethlehem, PA United States
Finding InstitutionLehigh University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.605002 N, 75.378306 W Map
Discovery Notes-collected under a tree outside of Taylor House at Lehigh University
-collected on January 22, 2018 at 5:43 pm after some light rainfall
-the soil was dark, damp and has some twigs inside
-the temperature was around 10 Celsius degrees
Naming NotesMy favorite dish is shrimp fried egg with rice.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 7, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1811
Genome length (bp)42594
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCCGCCGCCTTGG
GC Content66.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusBeing Annotated (Expected completion by 2/7/2019)
Plaque NotesThe head to tail ratio is approximately 1:2.7.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 8e12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload