| Detailed Information for Phage AlainaMarie |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Emily Kurburski |
| Year Found | 2016 |
| Location Found | Grand Rapids, MI USA |
| Finding Institution | Calvin University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.916072 N, 85.644454 W Map |
| Discovery Notes | Found in backyard compost pile of Professor Dave Warners |
| Naming Notes | Named after my niece because she was born five days after I was able to view my phage under an electron microscope. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 1, 2017 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 424 |
| Genome length (bp) | 61315 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGCTCT |
| GC Content | 51.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DJ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Calvin University |
| Annotation Status | In GenBank |
| Plaque Notes | Plaque sizes normally between 1-2 mm in diameter. Created a nice web plate when diluted to 10^-3 and had clear distinct plaques on 10^-5. |
| Number of Genes | 92 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ005675 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
2.2*10^9 |
| Date of SEA Lysate Titering |
Nov 28, 2016 |
| Pitt Freezer Box# |
38 |
| Pitt Freezer Box Grid# |
H10 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |