Gordonia phage OhMyWard
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Detailed Information for Phage OhMyWard
Discovery Information
Isolation HostGordonia rubripertincta Grub38
Found ByCassandra Ward
Year Found2019
Location FoundRiverside, CA USA
Finding InstitutionLa Sierra University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates33.9125 N, 62.499 W Map
Discovery NotesThe sample was collected under a Kumquat tree. I took from about 5 centimeters in the soil. The soil was damp and dark with some organic material in it.
Naming NotesI wanted to do a play on words with my name and my last name is Ward so I named my phage OhMyWard
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 8, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2236
Genome length (bp)60978
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGCCCT
GC Content52.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDJ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionLa Sierra University
Annotation StatusBeing Annotated (Expected completion by 10/8/2019)
Plaque NotesThe plaques from my phage are very small and lytic.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload