Detailed Information for Phage Avazak |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Gracie Millar and Adolfo Sotolongo |
Year Found | 2018 |
Location Found | Clarksville, AR USA |
Finding Institution | University of the Ozarks |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 35.479444 N, 93.468889 W Map |
Discovery Notes | Hot, humid day. Retrieved sample at 10:30am Elevation: 420ft. |
Naming Notes | The name of this phage is the Armenian translation of my dog, Bandit. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 28, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1413 |
Genome length (bp) | 60278 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of the Ozarks |
Annotation Status | In GenBank |
Plaque Notes | Plaques are small, definite |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN585971 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
93 |
Pitt Freezer Box Grid# |
D6 |
Available Files |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |