Gordonia phage EndAve
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Detailed Information for Phage EndAve | |
Discovery Information | |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Ava Endres |
Year Found | 2022 |
Location Found | Madison, WI United States |
Finding Institution | Madison Area Technical College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 75°C |
GPS Coordinates | 43.72 N, 89.1948 W Map |
Discovery Notes | Found along a ditch in water-soaked mulch. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1229 |
Genome length (bp) | 61253 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.4% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | Madison Area Technical College |
Annotation Status | In GenBank |
Plaque Notes | Small circular clear plaques |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | OR553900 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
SEA Lysate Titer | 2.2x10^10 |
Pitt Freezer Box# | 157 |
Pitt Freezer Box Grid# | A2 |
Available Files | |
EM Picture | Download |
GenBank File for Phamerator | Download |