Microbacterium phage Jefe
Jefe EM Picture
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Detailed Information for Phage Jefe
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Former namesElJefe
Found BySalvador Simpson
Year Found2020
Location FoundRadford, VA United States
Finding InstitutionRadford University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates37.102003 N, 80.567825 W Map
Discovery NotesGrassy hillside with lots of leaf litter
About 5cm depth
Naming NotesFrom the movie 22 Jump Street
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 18, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage57
Genome length (bp)53125
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesOn average the plaque size was 0.169cm in diameter
Number of Genes91
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Jefe_1
(terminase small subunit)

Jefe_2

Jefe_3

Jefe_4
(terminase)

Jefe_5

Jefe_6

Jefe_7

Jefe_8

Jefe_9

Jefe_10

Jefe_11

Jefe_12

Jefe_13

Jefe_14

Jefe_15

Jefe_16

Jefe_17

Jefe_18

Jefe_19

Jefe_20
(portal protein)

Jefe_21

Jefe_22

Jefe_23

Jefe_24

Jefe_25
(capsid maturation protease)

Jefe_26

Jefe_27
(major capsid hexamer protein)

Jefe_28
(major capsid pentamer protein)

Jefe_29

Jefe_30
(major tail protein)

Jefe_31
(head-to-tail adaptor)

Jefe_32

Jefe_33

Jefe_34
(tail assembly chaperone)

Jefe_35

Jefe_36
(tape measure protein)

Jefe_37
(minor tail protein)

Jefe_38
(minor tail protein)

Jefe_39
(minor tail protein)

Jefe_40
(minor tail protein)

Jefe_41

Jefe_42

Jefe_43
(endolysin)

Jefe_44

Jefe_45

Jefe_46

Jefe_47

Jefe_48
(exonuclease)

Jefe_49
(ERF family DNA pairing protein)

Jefe_50

Jefe_51

Jefe_52
(helix-turn-helix DNA binding domain protein)

Jefe_53
(ADP-ribosyltransferase)

Jefe_54
(HNH endonuclease)

Jefe_55

Jefe_56

Jefe_57

Jefe_58

Jefe_59
(helix-turn-helix DNA binding domain protein)

Jefe_60

Jefe_61
(DNA ligase)

Jefe_62

Jefe_63

Jefe_64
(ssDNA binding protein)

Jefe_65

Jefe_66
(helix-turn-helix DNA binding domain protein)

Jefe_67
(helix-turn-helix DNA binding domain protein)

Jefe_68

Jefe_69

Jefe_70

Jefe_71

Jefe_72

Jefe_73

Jefe_74

Jefe_75

Jefe_76

Jefe_77

Jefe_78

Jefe_79

Jefe_80

Jefe_81

Jefe_82
(helix-turn-helix DNA binding domain protein)

Jefe_83
(ParB-like nuclease domain protein)

Jefe_84

Jefe_85
(glycosyltransferase)

Jefe_86
(UDP-glucose dehydrogenase)

Jefe_87
(AAA-ATPase)

Jefe_88

Jefe_89

Jefe_90

Jefe_91

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP985602
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.74x10^10
Pitt Freezer Box# 127
Pitt Freezer Box Grid# E2
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload