| Detailed Information for Phage Jodelie19 |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Hannah Romo Barten |
| Year Found | 2019 |
| Location Found | North Las Vegas, NV USA |
| Finding Institution | College of Southern Nevada |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 36.2872 N, 115.177 W Map |
| Discovery Notes | Sample was collected in damp soil located near a duck pond. There were sparse patches of grass near the collection site and feathers indicating evidence of animals residing nearby. |
| Naming Notes | My chosen name came from a combination of relatives and the phage discovery year. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 21, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1814 |
| Genome length (bp) | 62331 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGCTCT |
| GC Content | 51.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DJ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | College of Southern Nevada |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques display a rounded morphology with a slightly cloudy tint approx. 1 mm in diameter. |
| Number of Genes | 91 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT498052 |
| Refseq Number | None yet |
| Published in Paper | Harrington et al 2021, Microbiology Resource Announcements: Genome Sequences of Gordonia Bacteriophages Jodelie19, BlingBling, and Burnsey |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
98 |
| Pitt Freezer Box Grid# |
C6 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
