| Detailed Information for Phage JordanFarm |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Jennifer Jordan |
| Year Found | 2020 |
| Location Found | Tampa, FL United States of America |
| Finding Institution | Hillsborough Community College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 27.96334 N, 82.42826 W Map |
| Discovery Notes | JordanFarm was found in the backyard of a home in Ybor city. The phage was collected from the dirt underneath a banana tree, where domestic chicken often scratch and feed from. |
| Naming Notes | The name JordanFarm was chosen to commemorate the family and the farm-like qualities of the yard in which the phage was collected from. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 18, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 316 |
| Genome length (bp) | 54520 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EK |
| Subcluster | EK2 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Hillsborough Community College |
| Annotation Status | In GenBank |
| Plaque Notes | The phage is 1mm in diameter, clear, and round. The phage appears either as small plaques that grow or as medium phages. |
| Morphotype | Podoviridae |
| Number of Genes | 57 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP405136 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
119 |
| Pitt Freezer Box Grid# |
A8 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
