Detailed Information for Phage Kerry |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Duplicates of this Phage | Lemon12 |
Found By | Leon Lin |
Year Found | 2016 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.431831 N, 79.952495 W Map |
Discovery Notes | Found in the soil of Schenley Plaza park |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 9, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1407 |
Genome length (bp) | 59608 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.1% |
Sequencing Notes | at 23502 bp approximately 25% of reads contain an A instead of consensus G |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | small, clear, about 1mm in diameter |
Morphotype | Siphoviridae |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG962369 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
C5 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |