The Actinobacteriophage Database

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Detailed Information for Phage Magritte
Discovery Information
Isolation Host	Microbacterium foliorum NRRL B-24224
Found By	Jenna R. St. Pierre
Year Found	2018
Location Found	Columbia, TN
Finding Institution	Columbia State Community College
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	28°C
GPS Coordinates	35.615 N, 87.1 W Map
Discovery Notes	Found under a sewage pipe
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Feb 19, 2023
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina
Approximate Shotgun Coverage	65
Genome length (bp)	133228
Character of genome ends	Circularly Permuted
End Determination Notes	While no distinct read buildups indicating defined termini were observed in the sequencing reads, the coverage did show a peak region, trailing off starkly in one direction and gently in the other. That area of the genome, however, doesn't seem to correlate to any expected biological "ends", so we just called this one circularly permuted and chose base 1 canonically.
GC Content	64.0%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	Singleton
Subcluster	--
Cluster Life Cycle	Unknown
Other Cluster Members	Click to View ArV2 Attoomi Barebow Cantare ChewyVIII Chymera CyranoPS DocB7 DrWorm DS6A E3 Elener EmiRose Eyre Finch Finkle Footloose FuzzBuster GAL1 Gilgamesh GMA1 GMA4 Gudmit Ibantik IdentityCrisis Jace JeanGrey Juicebox Kithara Kromp Kumao LilSpotty LuckyBarnes Magritte Min1 MooMoo mu16 OnionKnight P3MA PensacolaC28 phiAsp2 phiSAV Phroglets Pine5 Ponzi PSonyx pZL12 REQ2 REQ3 Reynauld RomansRevenge Root RRH1 Samy Shambre1 Shocker Shrew Sleepyhead Spartoi StAugustine Success Sunfish TinyDot TJE1 Tonitrus TPA2 TPA4 Trogglehumper TurkishDelight ValentiniPuff VanLee Whack Wollypog Yappy
Annotating Institution	Columbia State Community College
Annotation Status	In GenBank
Morphotype	Siphoviridae
Number of Genes	224
Number of tRNAs	26
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Magritte_1 Magritte_2 (exonuclease) Magritte_3 Magritte_4 (ASCE ATPase) Magritte_5 (UDP-glucose dehydrogenase) Magritte_6 (glycosyltransferase) Magritte_7 (HNH endonuclease) Magritte_8 (glycosyltransferase) Magritte_9 Magritte_10 Magritte_11 Magritte_12 (terminase) Magritte_13 (portal protein) Magritte_14 Magritte_15 Magritte_16 Magritte_17 Magritte_18 Magritte_19 (scaffolding protein) Magritte_20 Magritte_21 (major capsid protein) Magritte_22 Magritte_23 Magritte_24 Magritte_25 Magritte_26 Magritte_27 Magritte_28 Magritte_29 (minor capsid protein) Magritte_30 (tail terminator) Magritte_31 (glycosyltransferase) Magritte_32 Magritte_33 (major tail protein) Magritte_34 (tail assembly chaperone) Magritte_35 Magritte_36 (tape measure protein) Magritte_37 (minor tail protein) Magritte_38 (minor tail protein) Magritte_39 (minor tail protein) Magritte_40 Magritte_41 Magritte_42 Magritte_43 Magritte_44 Magritte_45 Magritte_46 (DNA helicase) Magritte_47 (DNA binding protein) Magritte_48 Magritte_49 (MazG-like nucleotide pyrophosphohydrolase) Magritte_50 Magritte_51 (DnaB-like dsDNA helicase) Magritte_52 (thymidylate synthase) Magritte_53 Magritte_54 Magritte_55 Magritte_56 Magritte_57 Magritte_58 Magritte_59 (DNA primase) Magritte_60 (DNA binding protein) Magritte_61 Magritte_62 (ASCE ATPase) Magritte_63 Magritte_64 Magritte_65 Magritte_66 Magritte_67 (ASCE ATPase) Magritte_68 Magritte_69 (DNA polymerase I) Magritte_70 Magritte_71 Magritte_72 (single-stranded DNA binding protein) Magritte_73 Magritte_74 Magritte_75 (RecA-like DNA recombinase) Magritte_76 Magritte_77 Magritte_78 (Lsr2-like DNA bridging protein) Magritte_79 (exonuclease) Magritte_80 Magritte_81 Magritte_82 Magritte_83 Magritte_84 Magritte_85 (HicA-like toxin) Magritte_86 — tRNA (tRNA-Leu(caa)) Magritte_87 — tRNA (tRNA-Trp(cca)) Magritte_88 Magritte_89 Magritte_90 — tRNA (tRNA-Pro(tgg)) Magritte_91 — tRNA (tRNA-Asp(gtc)) Magritte_92 — tRNA (tRNA-Glu(ctc)) Magritte_93 — tRNA (tRNA-Glu(ttc)) Magritte_94 — tRNA (tRNA-Tyr(gta)) Magritte_95 — tRNA (tRNA-Phe(gaa)) Magritte_96 — tRNA (tRNA-Leu(cag)) Magritte_97 — tRNA (tRNA-Leu(gag)) Magritte_98 Magritte_99 Magritte_100 — tRNA (tRNA-Ser(cga)) Magritte_101 — tRNA (tRNA-Ser(gct)) Magritte_102 — tRNA (tRNA-Lys(ctt)) Magritte_103 — tRNA (tRNA-Gly(tcc)) Magritte_104 — tRNA (tRNA-Gly(gcc)) Magritte_105 — tRNA (tRNA-Thr(cgt)) Magritte_106 — tRNA (tRNA-Thr(ggt)) Magritte_107 — tRNA (tRNA-Val(tac)) Magritte_108 — tRNA (tRNA-Asn(gtt)) Magritte_109 — tRNA (tRNA-Arg(acg)) Magritte_110 — tRNA (tRNA-Arg(ccg)) Magritte_111 — tRNA (tRNA-Gln(ctg)) Magritte_112 (HNH endonuclease) Magritte_113 — tRNA (tRNA-Lys(ttt)) Magritte_114 — tRNA (tRNA-Cys(gca)) Magritte_115 — tRNA (tRNA-Ala(tgc)) Magritte_116 (endolysin) Magritte_117 — tRNA (tRNA-Arg(tct)) Magritte_118 (Ro-like RNA binding protein) Magritte_119 Magritte_120 Magritte_121 Magritte_122 Magritte_123 (methyltransferase) Magritte_124 Magritte_125 Magritte_126 (band-7-like membrane protein) Magritte_127 Magritte_128 Magritte_129 Magritte_130 Magritte_131 Magritte_132 Magritte_133 Magritte_134 Magritte_135 Magritte_136 (HNH endonuclease) Magritte_137 (DNA binding protein) Magritte_138 Magritte_139 Magritte_140 Magritte_141 Magritte_142 Magritte_143 Magritte_144 Magritte_145 Magritte_146 Magritte_147 Magritte_148 Magritte_149 Magritte_150 Magritte_151 Magritte_152 Magritte_153 Magritte_154 Magritte_155 Magritte_156 Magritte_157 Magritte_158 Magritte_159 Magritte_160 Magritte_161 Magritte_162 Magritte_163 Magritte_164 Magritte_165 Magritte_166 Magritte_167 Magritte_168 Magritte_169 Magritte_170 Magritte_171 Magritte_172 Magritte_173 Magritte_174 Magritte_175 Magritte_176 Magritte_177 Magritte_178 Magritte_179 Magritte_180 Magritte_181 Magritte_182 Magritte_183 Magritte_184 Magritte_185 Magritte_186 Magritte_187 Magritte_188 Magritte_189 Magritte_190 Magritte_191 Magritte_192 Magritte_193 Magritte_194 Magritte_195 Magritte_196 Magritte_197 Magritte_198 Magritte_199 Magritte_200 Magritte_201 Magritte_202 Magritte_203 Magritte_204 Magritte_205 Magritte_206 Magritte_207 Magritte_208 Magritte_209 Magritte_210 Magritte_211 Magritte_212 Magritte_213 Magritte_214 Magritte_215 Magritte_216 Magritte_217 (5' nucleotidase) Magritte_218 Magritte_219 Magritte_220 Magritte_221 (deoxynucleoside monophosphate kinase) Magritte_222 Magritte_223 Magritte_224 Magritte_225 Magritte_226 Magritte_227 Magritte_228 (MRE11 double-strand break endo/exonuclease) Magritte_229 Magritte_230 Magritte_231 Magritte_232 Magritte_233 Magritte_234 (helix-turn-helix DNA binding domain protein) Magritte_235 Magritte_236 (3'-5' RNA ligase) Magritte_237 Magritte_238 Magritte_239 (DNA binding protein) Magritte_240 Magritte_241 (HNH endonuclease) Magritte_242 Magritte_243 Magritte_244 (nuclease) Magritte_245 Magritte_246 Magritte_247 (ASCE ATPase) Magritte_248 Magritte_249 Magritte_250
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	OR553905
Refseq Number	None yet
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	85
Pitt Freezer Box Grid#	B1
Available Files
Plaque Picture	Download
EM Picture	Download
GenBank File for Phamerator	Download

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