Gordonia phage Gudmit
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Detailed Information for Phage Gudmit
Discovery Information
Isolation HostGordonia terrae 3612
Found ByShefali Savarirayan
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4 N, 80.0 W Map
Discovery NotesIt was wet and the soil had an almost liquid consistency.
Naming NotesThis is a combination of my sister's and my name (Mitu and Guddu).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 3, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2069
Genome length (bp)42205
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCCCCCGGCG
GC Content65.9%
Sequencing Notes25% of population contains an 81 bp deletion of wt sequence 20721 - 20801 bp
at position 20754 approximately 50% of reads contain a G instead of consensus A
Fasta file available?Yes: Download fasta file
Cluster Life CycleUnknown
Lysogeny NotesIt is lysogenic.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesThis is a small plaque with a miniature halo around it.
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN813685
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 9.0 X 10^9
Date of SEA Lysate Titering Apr 5, 2017
Pitt Freezer Box# 55
Pitt Freezer Box Grid# G4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload