Rhodococcus phage Tonitrus
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Detailed Information for Phage Tonitrus
Discovery Information
Isolation HostRhodococcus equi NRRL B-16538
Duplicates of this PhageFlodtrolde
Found ByCharles Tavera
Year Found2023
Location FoundGrand Rapids, MI United States
Finding InstitutionCalvin University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates42.93155 N, 85.586913 W Map
Discovery NotesSoil sample was collected from area in between Schultze dorm and Commons dining hall. The soil was very dry and sandy with minimal foliage/ roots.
Naming NotesTonitrus is Latin for thunder. There was a thunderstorm approaching when I collected my soil sample. Also, the plaques are turbid and look like clouds, which remind of thunder.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1081
Genome length (bp)57971
Character of genome endsCircularly Permuted
GC Content69.0%
Sequencing NotesWhen sequenced, about 10% of the reads were a 100% match for REQ3.
Fasta file available?Yes: Download fasta file
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionCalvin University
Annotation StatusAwaiting_QC
Plaque NotesPlaques are quite small, roughly 1 mm in diameter. Plaques were cloudy with unclear, rough borders.
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 185
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
EM PictureDownload