Detailed Information for Phage Juicebox |
Discovery Information |
Isolation Host | Corynebacterium xerosis ATCC 373 |
Found By | Aneesh Pathak and Ote Staton |
Year Found | 2017 |
Location Found | Birmingham, AL USA |
Finding Institution | University of Alabama at Birmingham |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 33.543682 N, 86.779633 W Map |
Discovery Notes | Sewage influent. The isolation temperature was initially 30 C, but plaques took 72-120 hours to appear. When we moved to the 37 C temperature, the plaques appeared within 48 hours, so we continued to isolate/incubate at 37 C for the sake of time. |
Naming Notes | The name comes from the hit movie Kicking and Screaming starring Will Ferrell and NFL Hall of Fame coach Mike Ditka. This movie was influential in our childhoods so we call our phage Juicebox to commemorate our separate but similar pasts. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 21, 2017 |
Genome length (bp) | 41394 |
Character of genome ends | Unknown |
Overhang Length | 10 bases |
Overhang Sequence | CGGAGGGCAT |
GC Content | 67.9% |
Sequencing Notes | at position 3208 bp approximately 25% of reads contain an A instead of consensus G |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | University of Alabama at Birmingham |
Annotation Status | In GenBank |
Plaque Notes | The plaques are consistently small (0.5mm diameters) and cloudy. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH727550 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
59 |
Pitt Freezer Box Grid# |
E2 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |