Rhodococcus phage E3

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Detailed Information for Phage E3
Discovery Information
Isolation HostRhodococcus equi NCIMB 10027
Found ByUnavailable
Year Found2010
Location FoundEdinburgh, United Kingdom
ProgramUnavailable
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 14, 2013
Sequencing FacilityRoche/454
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage24
Genome length (bp)142563
Character of genome endsCircularly Permuted
GC Content67.5%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterSingleton
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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E3_gp1

E3_gp2
(putative holin)

E3_gp3
(putative integral membrane protein)

E3_gp4
(putative membrane protein)

E3_gp5
(putative terminase large subunit)

E3_gp6
(putative secreted protein)

E3_gp7

E3_gp8

E3_gp9
(putative membrane protein)

E3_gp10

E3_gp11

E3_gp12

E3_gp13

E3_gp14

E3_gp15

E3_gp16

E3_gp16.5

E3_gp17

E3_gp18

E3_gp19

E3_gp20

E3_gp21

E3_gp22

E3_gp23

E3_gp24

E3_gp25

E3_gp26

E3_gp27

E3_gp28

E3_gp29

E3_gp30

E3_gp31

E3_gp32

E3_gp33

E3_gp34

E3_gp35

E3_gp36

E3_gp36.5

E3_gp36.7

E3_gp37

E3_gp38

E3_gp39

E3_gp40

E3_gp41

E3_gp42

E3_gp43

E3_gp44
(putative integral membrane protein)

E3_gp45
(putative integral membrane protein)

E3_gp46

E3_gp47

E3_gp47.5

E3_gp48

E3_gp49
(putative integral membrane protein)

E3_gp50
(putative DNA-binding helix-turn-helix protein)

E3_gp51

E3_gp52

E3_gp53

E3_gp54

E3_gp55

E3_gp56

E3_gp57

E3_gp58

E3_gp59

E3_gp60

E3_gp61

E3_gp62

E3_gp63

E3_gp64

E3_gp65

E3_gp66
(Thy1, putative thymidylate synthase complementing protein)

E3_gp67

E3_gp68

E3_gp69

E3_gp71

E3_gp72
(portal protein)

E3_gp73

E3_gp74
(putative 2'-5' RNA ligase LigT)

E3_gp75
(WhiB-like protein)

E3_gp76
(LysM-like protein)

E3_gp77
(prohead protease)

E3_gp78

E3_gp79
(major capsid protein)

E3_gp80

E3_gp81

E3_gp82

E3_gp83

E3_gp84
(putative SGNH-hydrolase)

E3_gp85
(putative cutinase)

E3_gp86
(putative tail fiber protein)

E3_gp87

E3_gp88
(putative tail fiber protein)

E3_gp89

E3_gp90

E3_gp90.5

E3_gp91

E3_gp92

E3_gp93

E3_gp94

E3_gp95

E3_gp96

E3_gp97

E3_gp98
(putative amidase)

E3_gp99

E3_gp100
(Hep_Hag family structural protein)

E3_gp101

E3_gp102

E3_gp103

E3_gp104

E3_gp105

E3_gp106

E3_gp107

E3_gp108

E3_gp109

E3_gp110
(minor tail protein)

E3_gp111
(putative phage tail sheath protein)

E3_gp112
(tail tube protein)

E3_gp113

E3_gp114

E3_gp115

E3_gp116
(putative tape measure protein)

E3_gp117

E3_gp117.5

E3_gp118

E3_gp119
(baseplate protein)

E3_gp120

E3_gp121
(putative phage baseplate assembly protein W)

E3_gp122
(putative baseplate J family protein)

E3_gp123
(baseplate I protein)

E3_gp124

E3_gp125

E3_gp126

E3_gp127

E3_gp127.5

E3_gp128

E3_gp129

E3_gp130

E3_gp131

E3_gp131.5

E3_gp132

E3_gp133

E3_gp134
(putative RNA polymerase sigma-70 factor, SigBFG subfamily)

E3_gp135

E3_gp136
(putative helicase)

E3_gp137
(putative transcriptional regulator, GntR family protein)

E3_gp138

E3_gp139

E3_gp140

E3_gp141

E3_gp142

E3_gp143
(putative 5'-3'exonuclease)

E3_gp144

E3_gp145
(putative aminotransferase)

E3_gp146

E3_gp147

E3_gp148
(DnaC-like DNA replication protein)

E3_gp149
(DnaB-like helicase)

E3_gp150
(DnaG-like DNA primase)

E3_gp150.5

E3_gp151
(putative HNH endonuclease)

E3_gp152
(putative DnaJ-like chaperone protein)

E3_gp153

E3_gp154
(DnaE-like DNA polymerase III alpha subunit)

E3_gp155
(putative RecA-like DNA recombination protein)

E3_gp156

E3_gp157

E3_gp158
(RuvC-like resolvase superfamily protein)

E3_gp159

E3_gp160
(putative RNA polymerase sigma-70 factor, region 4)

E3_gp161

E3_gp162

E3_gp163

E3_gp164

E3_gp165

E3_gp166

E3_gp167

E3_gp168

E3_gp169

E3_gp170

E3_gp171

E3_gp171.5
(putative membrane protein)

E3_gp172
(putative Band_7 superfamily protein)

E3_gp173

E3_gp174

E3_gp175

E3_gp176

E3_gp177
(putative integral membrane protein)

E3_gp178
(putative phosphoribosyl-ATPpyrophosphohydrolase)

E3_gp179

E3_gp180

E3_gp181
(putative transcriptional regulator)

E3_gp182
(putative membrane protein)

E3_gp183

E3_gp184

E3_gp185

E3_gp186
(putative DNA polymerase III subunit epsilon)

E3_gp187

E3_gp187.5

E3_gp188

E3_gp189

E3_gp189.5

E3_gp190

E3_gp191

E3_gp192

E3_gp193

E3_gp194

E3_gp195

E3_gp196

E3_gp197

E3_gp198

E3_gp199
(putative HNH endonuclease)

E3_gp200

E3_gp201

E3_gp202
(putative histone deacetylase protein)

E3_gp203

E3_gp204
(putative tail fiber protein)

E3_gp205

E3_gp206
(putative aminotransferase)

E3_gp207

E3_gp208

E3_gp209

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionHM114277
Refseq NumberNC_021347
Archiving Info
Archiving status Not in Pitt Archives