| Detailed Information for Phage MiamiPanther | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Grace Intrator, Betty Sierra |
| Year Found | 2023 |
| Location Found | Miami Beach, FL United States |
| Finding Institution | Florida International University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 25.78789 N, 80.1291 W Map |
| Discovery Notes | It was found in the garden of an apartment building. It is found in wet soil, full of organic matter, surrounded by plants and flowers. It was collected close to the surface, and the temperature was 90 degrees Fahrenheit. |
| Naming Notes | Since we found our phage in the area of Miami, we wanted to make a reference to that as well as showing our school pride by calling it Panther, like FIU's mascot. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 17, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 4213 |
| Genome length (bp) | 53944 |
| Character of genome ends | Circularly Permuted |
| GC Content | 56.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EK |
| Subcluster | EK1 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to ViewEugeneKrabs (None) KingKamren (None) Zhengyi (None) Alex44 (EK1) ArMaWen (EK1) Biozilla (EK1) Birdfeeder (EK1) BlueRugrat (EK1) Corn21 (EK1) CrunchyBoi (EK1) Dashyla (EK1) DumpQuist (EK1) HitchHiker (EK1) JessellCookie (EK1) LesNorah (EK1) LilyLou (EK1) MiamiPanther (EK1) Oatly (EK1) Pabst (EK1) Phogo (EK1) PineapplePluto (EK1) Stormbreaker (EK1) SwissCheezer (EK1) TicTac (EK1) TinyTimothy (EK1) TownLake (EK1) Unphazed (EK1) Wesak (EK1) Xitlalli (EK1) YellowPanda (EK1) Akoni (EK2) AloeVera (EK2) Ashton (EK2) Astartes (EK2) Atraxi (EK2) Barroma (EK2) Fede (EK2) Fullmetal (EK2) JimmyPG (EK2) JordanFarm (EK2) Keough (EK2) Kosier (EK2) Mazun (EK2) Moleficent (EK2) Morrill (EK2) Pharky (EK2) Phedro (EK2) Phractured (EK2) PhriedRice (EK2) RicoCaldo (EK2) ShyRosie (EK2) StagePhright (EK2) ThirteenKH (EK2) TrippleS (EK2) Truong (EK2) Waterlily (EK2) Yafa (EK2) |
| Annotating Institution | Florida International University |
| Annotation Status | Awaiting_QC |
| Plaque Notes | The plaques are round, clear, and really small (the biggest was 1 mm in diameter). |
| Morphotype | Podoviridae |
| Number of Genes | 55 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewMiamiPanther_1 MiamiPanther_2 MiamiPanther_3 MiamiPanther_4 MiamiPanther_5 MiamiPanther_6 MiamiPanther_7 MiamiPanther_8 MiamiPanther_9 MiamiPanther_10 MiamiPanther_11 MiamiPanther_12 MiamiPanther_13 MiamiPanther_14 MiamiPanther_15 MiamiPanther_16 MiamiPanther_17 MiamiPanther_18 MiamiPanther_19 MiamiPanther_20 MiamiPanther_21 MiamiPanther_22 MiamiPanther_23 MiamiPanther_24 MiamiPanther_25 MiamiPanther_26 MiamiPanther_27 MiamiPanther_28 MiamiPanther_29 MiamiPanther_30 MiamiPanther_31 MiamiPanther_32 MiamiPanther_33 MiamiPanther_34 MiamiPanther_35 MiamiPanther_36 MiamiPanther_37 MiamiPanther_38 MiamiPanther_39 MiamiPanther_40 MiamiPanther_41 MiamiPanther_42 MiamiPanther_43 MiamiPanther_44 MiamiPanther_45 MiamiPanther_46 MiamiPanther_47 MiamiPanther_48 MiamiPanther_49 MiamiPanther_50 MiamiPanther_51 MiamiPanther_52 MiamiPanther_53 MiamiPanther_54 MiamiPanther_55 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 175 |
| Pitt Freezer Box Grid# | A2 |