Detailed Information for Phage Nadmeg |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Nadia Rueda and Megan Katz |
Year Found | 2017 |
Location Found | CHEVY CHASE, MD US |
Finding Institution | Howard Hughes Medical Institute |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 38.998083 N, 77.07919 W Map |
Naming Notes | Named after the two individuals that found this phage. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 16, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 400 |
Genome length (bp) | 61137 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Louisiana at Monroe |
Annotation Status | In GenBank |
Plaque Notes | small & clear |
Number of Genes | 90 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ622168 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |