Microbacterium phage Savannah
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Detailed Information for Phage Savannah
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Former namesDarthPlagueis
Found ByCarter Joyce
Year Found2019
Location FoundAmes, IA United States
Finding InstitutionIowa State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature23°C
GPS Coordinates42.02325 N, 93.638195 W Map
Naming NotesSavannah Marie Kallaus
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage93
Genome length (bp)53396
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionIowa State University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes89
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Savannah_1
(terminase small subunit)

Savannah_2

Savannah_3
(terminase)

Savannah_4

Savannah_5

Savannah_6

Savannah_7

Savannah_8

Savannah_9

Savannah_10

Savannah_11

Savannah_12

Savannah_13

Savannah_14

Savannah_15

Savannah_16

Savannah_17

Savannah_18

Savannah_19
(portal protein)

Savannah_20

Savannah_21

Savannah_22

Savannah_23

Savannah_24
(capsid maturation protease)

Savannah_25

Savannah_26
(major capsid hexamer protein)

Savannah_27
(major capsid pentamer protein)

Savannah_28

Savannah_29
(major tail protein)

Savannah_30

Savannah_31

Savannah_32

Savannah_33
(tail assembly chaperone)

Savannah_34
(tail assembly chaperone)

Savannah_35
(tape measure protein)

Savannah_36
(minor tail protein)

Savannah_37
(minor tail protein)

Savannah_38
(minor tail protein)

Savannah_39
(minor tail protein)

Savannah_40

Savannah_41

Savannah_42
(endolysin)

Savannah_43

Savannah_44

Savannah_45

Savannah_46

Savannah_47
(exonuclease)

Savannah_48
(ERF family ssDNA binding protein)

Savannah_49

Savannah_50

Savannah_51
(helix-turn-helix DNA binding domain protein)

Savannah_52
(ADP-ribosyltransferase)

Savannah_53
(HNH endonuclease)

Savannah_54

Savannah_55

Savannah_56

Savannah_57

Savannah_58

Savannah_59

Savannah_60

Savannah_61

Savannah_62

Savannah_63
(ssDNA binding protein)

Savannah_64

Savannah_65
(helix-turn-helix DNA binding domain protein)

Savannah_66
(helix-turn-helix DNA binding domain protein)

Savannah_67

Savannah_68

Savannah_69

Savannah_70

Savannah_71

Savannah_72

Savannah_73

Savannah_74

Savannah_75

Savannah_76

Savannah_77

Savannah_78

Savannah_79

Savannah_80

Savannah_81
(DNA binding protein)

Savannah_82
(ParB-like nuclease domain protein)

Savannah_83
(glycosyltransferase)

Savannah_84
(UDP-glucose dehydrogenase)

Savannah_85
(AAA-ATPase)

Savannah_86

Savannah_87

Savannah_88

Savannah_89

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON081330
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 108
Pitt Freezer Box Grid# E12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload