Gordonia phage Tanis
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| Detailed Information for Phage Tanis | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Betty Kliewer |
| Year Found | 2017 |
| Location Found | Grand Rapids, MI USA |
| Finding Institution | Calvin University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.931 N, 85.5889 W Map |
| Discovery Notes | The phage was isolated from a soil sample that was collected from a soil bed. The soil was very wet when it was isolated and contained a lot of organic matter such as decaying leaves and wood chips. |
| Naming Notes | Phage is named after the Phoenician goddess of the moon. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 18, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Genome length (bp) | 59727 |
| Character of genome ends | Unknown |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGCTCT |
| GC Content | 51.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DJ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | In GenBank |
| Plaque Notes | The phage was isolated on Gordonia terrae. It was only isolated after being plated twice, as it took time to isolate. The plaques are very small, less than a mm in diameter and are very numerous. It's believed that this phage is temperate because the plague are very cloudy and do not have clearly defined edges. |
| Morphotype | Siphoviridae |
| Number of Genes | 93 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN284904 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 4.2 x 10^6 |
| Pitt Freezer Box# | 74 |
| Pitt Freezer Box Grid# | B12 |
| Available Files | |
| EM Picture | Download |
| GenBank File for Phamerator | Download |