Rhodococcus phage Trogglehumper
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Detailed Information for Phage Trogglehumper | |
Discovery Information | |
Isolation Host | Rhodococcus erythropolis NRRL B-1574 |
Found By | Jaelin Roberts |
Year Found | 2018 |
Location Found | Greenville, ME USA |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 45.585037 N, 69.302984 W Map |
Discovery Notes | Trogglehumper(TH) was collected from West Branch Pond in Greenville, Maine during the summer. |
Naming Notes | Trogglehumper is the name of a bad dream in the BFG. It was dream to work on this project, but this phage was hard to isolate! |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 778 |
Genome length (bp) | 83592 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 330 bp |
GC Content | 63.8% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Queensborough Community College |
Annotation Status | In GenBank |
Plaque Notes | TH has small clear pinprick plaques |
Morphotype | Siphoviridae |
Number of Genes | 121 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | OQ709222 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 109 |
Pitt Freezer Box Grid# | H1 |
Available Files | |
EM Picture | Download |
GenBank File for Phamerator | Download |