Rhodococcus phage Trogglehumper
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Detailed Information for Phage Trogglehumper
Discovery Information
Isolation HostRhodococcus erythropolis NRRL B-1574
Found ByJaelin Roberts
Year Found2018
Location FoundGreenville, ME USA
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates45.585037 N, 69.302984 W Map
Discovery NotesTrogglehumper(TH) was collected from West Branch Pond in Greenville, Maine during the summer.
Naming NotesTrogglehumper is the name of a bad dream in the BFG. It was dream to work on this project, but this phage was hard to isolate!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage778
Genome length (bp)83592
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length330 bp
GC Content63.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterSingleton
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionQueensborough Community College
Annotation StatusIn GenBank
Plaque NotesTH has small clear pinprick plaques
MorphotypeSiphoviridae
Number of Genes121
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ709222
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 109
Pitt Freezer Box Grid# H1
Available Files
EM PictureDownload
GenBank File for PhameratorDownload