| Detailed Information for Phage Trogglehumper |
| Discovery Information |
| Isolation Host | Rhodococcus erythropolis NRRL B-1574 |
| Found By | Jaelin Roberts |
| Year Found | 2018 |
| Location Found | Greenville, ME USA |
| Finding Institution | University of Maine, Honors College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 45.585037 N, 69.302984 W Map |
| Discovery Notes | Trogglehumper(TH) was collected from West Branch Pond in Greenville, Maine during the summer. |
| Naming Notes | Trogglehumper is the name of a bad dream in the BFG. It was dream to work on this project, but this phage was hard to isolate! |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 6, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 778 |
| Genome length (bp) | 83592 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 330 bp |
| GC Content | 63.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | Singleton |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Queensborough Community College |
| Annotation Status | In GenBank |
| Plaque Notes | TH has small clear pinprick plaques |
| Morphotype | Siphoviridae |
| Number of Genes | 121 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OQ709222 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
109 |
| Pitt Freezer Box Grid# |
H1 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
