Gordonia phage Harambe
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Detailed Information for Phage Harambe
Discovery Information
Isolation HostGordonia terrae 3612
Found ByCorbin Fry
Year Found2016
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.445986 N, 79.953236 W Map
Discovery NotesThe soil was collected on a sunny partly cloudy day with dry weather on the past 24 hours. The gps coordinates were N 40° 15' 52.4622" W -79° 34' 16.3992". This soil will be used to isolate possible phages in it through direct and enriched isolation. The soil was collected in a zip-lock bag outside of Clapp Hall at the University of Pittsburgh.
Naming NotesThis is named after a pet.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 31, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1160
Genome length (bp)73511
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length184 bp
GC Content59.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS3
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusOverdue (Expected completion by 5/15/2018)
Plaque NotesSmall clear circluar plaques
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5.0 x 10^9
Date of SEA Lysate Titering Oct 26, 2016
Pitt Freezer Box# 42
Pitt Freezer Box Grid# E2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload