| Detailed Information for Phage Citrus | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Aqsa Owais |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.442 N, 79.956 W Map |
| Discovery Notes | Group Members: Alara Anter, Charlotte Bentley, and Aqsa Owais The soil came from a maintained flower bed near Forbes Ave. The surrounding area was paved and separated from nature. The soil was wet to the touch, soft, and had a grainy texture. I did not have difficulty filtering the sample. |
| Naming Notes | We like oranges! Yum! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 3150 |
| Genome length (bp) | 61136 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGCTCT |
| GC Content | 51.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DJ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAflac AlainaMarie Arataki Artorias Avazak BetterYeti BluerMoon Burley Captrips Capybara Chikenjars Citrus Conley Crocheter Dancer Demure Duffington Eddiemania EndAve Fazel Figliar FortCran Gill Gravy Gusicorn Hortihabitatio Hydrus Jodelie19 JulesRay Kenosha Kerry Madvan Magel MajinBuu Mossy Mysticmoon Nadmeg Nithya NoPickles Odesza OhMyWard OlgasClover Perkunas Petito Phepper Pherobrine Rickmore Roney Runhaar Schwartz33 Secretariat ShaggyRogers Talon44 Tanis TenaciousP Trufflozitus Untouchable Vardy Zeph |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Plaque Notes | Clear, small plaques, circular boundaries/edges |
| Morphotype | Siphoviridae |
| Number of Genes | 92 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewCitrus_1 Citrus_2 Citrus_3 Citrus_4 Citrus_5 Citrus_6 Citrus_7 Citrus_8 Citrus_9 Citrus_10 Citrus_11 Citrus_12 Citrus_13 Citrus_14 Citrus_15 Citrus_16 Citrus_17 Citrus_18 Citrus_19 Citrus_20 Citrus_21 Citrus_22 Citrus_23 Citrus_24 Citrus_25 Citrus_26 Citrus_27 Citrus_28 Citrus_29 Citrus_30 Citrus_31 Citrus_32 Citrus_33 Citrus_34 Citrus_35 Citrus_36 Citrus_37 Citrus_38 Citrus_39 Citrus_40 Citrus_41 Citrus_42 Citrus_43 Citrus_44 Citrus_45 Citrus_46 Citrus_47 Citrus_48 Citrus_49 Citrus_50 Citrus_51 Citrus_52 Citrus_53 Citrus_54 Citrus_55 Citrus_56 Citrus_57 Citrus_58 Citrus_59 Citrus_60 Citrus_61 Citrus_62 Citrus_63 Citrus_64 Citrus_65 Citrus_66 Citrus_67 Citrus_68 Citrus_69 Citrus_70 Citrus_71 Citrus_72 Citrus_73 Citrus_74 Citrus_75 Citrus_76 Citrus_77 Citrus_78 Citrus_79 Citrus_80 Citrus_81 Citrus_82 Citrus_83 Citrus_84 Citrus_85 Citrus_86 Citrus_87 Citrus_88 Citrus_89 Citrus_90 Citrus_91 Citrus_92 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 189 |
| Pitt Freezer Box Grid# | A3 |
| Available Files | |
| Plaque Picture | Download |
