Gordonia phage Clown
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Detailed Information for Phage Clown
Discovery Information
Isolation HostGordonia terrae 3612
Found ByPooja Tallapaneni
Year Found2019
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.445 N, 79.961944 W Map
Discovery NotesFound outside Panther Hall along the path that runs from the Chevron steps to Sutherland Hall.
Naming NotesIt is a term of endearment among friends of the individual who found the phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1526
Genome length (bp)58203
Character of genome endsCircularly Permuted
GC Content65.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes95
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Clown_1
(helix-turn-helix DNA binding domain protein)

Clown_2

Clown_3

Clown_4

Clown_5
(terminase)

Clown_6

Clown_7

Clown_8

Clown_9
(methyltransferase)

Clown_10

Clown_11
(methyltransferase)

Clown_12
(nucleoside deoxyribosyltransferase)

Clown_13

Clown_14

Clown_15

Clown_16
(portal protein)

Clown_17

Clown_18
(MuF-like minor capsid protein)

Clown_19

Clown_20
(capsid maturation protease)

Clown_21
(RNA ligase)

Clown_22

Clown_23
(major capsid hexamer protein)

Clown_24

Clown_25

Clown_26
(major tail protein)

Clown_27
(head-to-tail adaptor)

Clown_28

Clown_29

Clown_30
(tail assembly chaperone)

Clown_31
(tail assembly chaperone)

Clown_32

Clown_33
(tape measure protein)

Clown_34
(minor tail protein)

Clown_35
(minor tail protein)

Clown_36

Clown_37
(minor tail protein)

Clown_38

Clown_39

Clown_40
(esterase)

Clown_41
(esterase)

Clown_42

Clown_43

Clown_44
(lysin A, L-Ala-D-Glu peptidase domain)

Clown_45
(lysin A, glycosyl hydrolase domain)

Clown_46
(holin)

Clown_47

Clown_48

Clown_49

Clown_50
(lysin B)

Clown_51

Clown_52
(serine integrase)

Clown_53

Clown_54

Clown_55

Clown_56
(tyrosine integrase)

Clown_57
(immunity repressor)

Clown_58
(helix-turn-helix DNA binding domain protein)

Clown_59
(antirepressor)

Clown_60

Clown_61

Clown_62

Clown_63

Clown_64
(HNH endonuclease)

Clown_65

Clown_66
(Cas4 family exonuclease)

Clown_67
(RecT-like ssDNA binding protein)

Clown_68

Clown_69

Clown_70
(helix-turn-helix DNA binding domain protein)

Clown_71
(methyltransferase)

Clown_72
(helix-turn-helix DNA binding domain protein)

Clown_73

Clown_74

Clown_75

Clown_76
(RuvC-like resolvase)

Clown_77

Clown_78

Clown_79

Clown_80

Clown_81

Clown_82

Clown_83
(endonuclease VII)

Clown_84

Clown_85

Clown_86

Clown_87

Clown_88

Clown_89

Clown_90

Clown_91

Clown_92
(helix-turn-helix DNA binding domain protein)

Clown_93

Clown_94

Clown_95

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT771343
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 114
Pitt Freezer Box Grid# A6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload