Gordonia phage Phlop
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Detailed Information for Phage Phlop
Discovery Information
Isolation HostGordonia terrae 3612
Found ByEden Dennis
Year Found2019
Location FoundMonroe, LA USA
Finding InstitutionUniversity of Louisiana at Monroe
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates32.529663 N, 92.075015 W Map
Discovery NotesFound near a tree, under mushrooms and bird droppings
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 8, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1844
Genome length (bp)58358
Character of genome endsCircularly Permuted
GC Content67.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Louisiana at Monroe
Annotation StatusIn GenBank
Plaque NotesStarted out with both turbid and clear plaques, now plaques are small and clear
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Phlop_1
(helix-turn-helix DNA binding domain)

Phlop_2

Phlop_3

Phlop_4

Phlop_5
(terminase)

Phlop_6

Phlop_7

Phlop_8
(ASC-1 transcription coactivator)

Phlop_9

Phlop_10
(polynucleotide kinase)

Phlop_11

Phlop_12
(portal protein)

Phlop_13

Phlop_14
(ADP-ribosyltransferase domain and MuF-like fusion protein)

Phlop_15

Phlop_16

Phlop_17
(RNA ligase)

Phlop_18

Phlop_19
(major capsid protein)

Phlop_20

Phlop_21

Phlop_22
(major tail protein)

Phlop_23
(head-to-tail adaptor)

Phlop_24

Phlop_25

Phlop_26

Phlop_27
(tail assembly chaperone)

Phlop_28

Phlop_29
(tape measure protein)

Phlop_30
(minor tail protein)

Phlop_31
(minor tail protein)

Phlop_32

Phlop_33
(minor tail protein)

Phlop_34

Phlop_35
(minor tail protein)

Phlop_36

Phlop_37

Phlop_38
(lysin A)

Phlop_39
(holin)

Phlop_40

Phlop_41

Phlop_42

Phlop_43
(lysin B)

Phlop_44
(serine integrase)

Phlop_45

Phlop_46
(tyrosine integrase)

Phlop_47
(immunity repressor)

Phlop_48
(helix-turn-helix DNA binding domain)

Phlop_49

Phlop_50

Phlop_51

Phlop_52

Phlop_53
(Cas4 family exonuclease)

Phlop_54
(RecT-like ssDNA binding protein)

Phlop_55

Phlop_56

Phlop_57
(DNA methylase)

Phlop_58
(helix-turn-helix DNA binding domain)

Phlop_59
(helix-trun-helix DNA binding domain)

Phlop_60

Phlop_61
(RuvC-like resovase)

Phlop_62

Phlop_63

Phlop_64

Phlop_65

Phlop_66

Phlop_67

Phlop_68

Phlop_69

Phlop_70
(PnuC-like nicotinamide riboside transporter)

Phlop_71

Phlop_72

Phlop_73

Phlop_74

Phlop_75

Phlop_76

Phlop_77

Phlop_78

Phlop_79
(methyltransferase)

Phlop_80

Phlop_81

Phlop_82
(HNH endonuclease)

Phlop_83
(helix-turn-helix DNA binding domain)

Phlop_84

Phlop_85

Phlop_86

Phlop_87

Phlop_88

Phlop_89

Phlop_90

Phlop_91

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW507125
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 111
Pitt Freezer Box Grid# C11
Available Files
GenBank File for PhameratorDownload