Gordonia phage Salvador
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Detailed Information for Phage Salvador
Discovery Information
Isolation HostGordonia terrae 3612
Found ByZivan Nusfaumer
Year Found2021
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.44399 N, 79.954575 W Map
Discovery NotesThis phage was donated by Victoria Przybos and Calista Walk
Naming NotesThe name was inspired by one of the main characters in the Borderlands video game franchise.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 3, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage806
Genome length (bp)58458
Character of genome endsCircularly Permuted
GC Content67.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Ibadan
Annotation StatusQC Complete
Plaque NotesThe phage seems to be lysogenic due to the amount of rounds containing turbid and murky plaques
Has been Phamerated?Yes
Gene List

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Salvador_1
(helix-turn-helix DNA binding domain)

Salvador_2

Salvador_3

Salvador_4

Salvador_5
(terminase)

Salvador_6

Salvador_7

Salvador_8
(ASC-1 transcription coactivator)

Salvador_9

Salvador_10
(Polynucleotide Kinase)

Salvador_11

Salvador_12
(Portal protein)

Salvador_13

Salvador_14
(ADP-ribosyltransferase)

Salvador_15

Salvador_16

Salvador_17
(RNA ligase)

Salvador_18

Salvador_19
(Major capsid hexamer protein)

Salvador_20

Salvador_21

Salvador_22
(Major tail protein)

Salvador_23
(Head-to-tail connector)

Salvador_24

Salvador_25

Salvador_26

Salvador_27
(Tail assembly chaperone)

Salvador_28

Salvador_29
(Tape measure protein)

Salvador_30
(Minor tail protein)

Salvador_31
(Minor tail protein)

Salvador_32

Salvador_33
(Minor tail protein)

Salvador_34

Salvador_35
(Minor tail protein)

Salvador_36

Salvador_37

Salvador_38
(Lysin A)

Salvador_39
(Holin)

Salvador_40

Salvador_41

Salvador_42

Salvador_43
(Lysin B)

Salvador_44
(Serine integrase)

Salvador_45

Salvador_46
(Tyrosine integrase)

Salvador_47
(Immunity repressor)

Salvador_48
(helix-turn-helix DNA binding domain)

Salvador_49

Salvador_50

Salvador_51

Salvador_52

Salvador_53
(RecE-like exonuclease)

Salvador_54
(RecT-like ssDNA binding protein)

Salvador_55

Salvador_56

Salvador_57

Salvador_58

Salvador_59
(helix-turn-helix DNA binding domain)

Salvador_60
(helix-turn-helix DNA binding domain)

Salvador_61

Salvador_62
(RuvC-like resolvase)

Salvador_63

Salvador_64

Salvador_65

Salvador_66

Salvador_67

Salvador_68

Salvador_69

Salvador_70

Salvador_71
(Histidine triad nucleotide binding protein)

Salvador_72
(nicotinamide ribosyltransferase)

Salvador_73

Salvador_74

Salvador_75

Salvador_76

Salvador_77

Salvador_78

Salvador_79

Salvador_80

Salvador_81

Salvador_82
(DNA methylase)

Salvador_83

Salvador_84
(HNH Endonuclease)

Salvador_85
(HNH Endonuclease)

Salvador_86
(helix-turn-helix DNA binding domain)

Salvador_87

Salvador_88

Salvador_89

Salvador_90

Salvador_91

Salvador_92

Salvador_93

Salvador_94

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 141
Pitt Freezer Box Grid# G5
Available Files
GenBank File for PhameratorDownload