| Detailed Information for Phage Halo3 |
| Discovery Information |
| Isolation Host | Gordonia terrae CAG3 |
| Found By | Haley Chavey |
| Year Found | 2021 |
| Location Found | Wamego, KS United States |
| Finding Institution | Kansas State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 25°C |
| GPS Coordinates | 39.24492 N, 96.316794 W Map |
| Discovery Notes | Sample was collected from the floor of a chicken coop about an inch down. Soil was fine or powdery and a light brown color. Organic matter and small pieces of straw hay were present |
| Naming Notes | My nickname and my lucky number. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 18, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 938 |
| Genome length (bp) | 59182 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DC |
| Subcluster | DC1 |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Phage has lysogen presence. This is confirmed by the result of patch assays. |
| Other Cluster Members |
|
| Annotating Institution | Franklin Pierce University |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 93 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OR521081 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
1x10^10 pfu/mL |
| Pitt Freezer Box# |
140 |
| Pitt Freezer Box Grid# |
A1 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
