Detailed Information for Phage Odesza |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Former names | Catherine |
Found By | Grace Anderson |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 40.43347 N, 79.956592 W Map |
Discovery Notes | Found near base of a tree. Soil was slightly moist and it was fairly warm outside, 68 degrees F. |
Naming Notes | Naming after a close friend of mine. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 19, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1811 |
Genome length (bp) | 59746 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of the Ozarks |
Annotation Status | In GenBank |
Plaque Notes | Consistently round plaques, ranging from 1 to 1.75 mm. Plaques were clear suggesting lytic cycle. |
Morphotype | Siphoviridae |
Number of Genes | 92 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN585988 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
57 |
Pitt Freezer Box Grid# |
H1 |
Available Files |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |