Detailed Information for Phage OlgasClover |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Ambar Pena Sanchez |
Year Found | 2022 |
Location Found | Las Vegas, NV USA |
Finding Institution | College of Southern Nevada |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 36.12535 N, 115.27746 W Map |
Discovery Notes | Found phage from a clover field at a park near a memorial site for a woman named Olga. A lot of trees and clovers around the park. |
Naming Notes | Phage was named after Olga and the clovers around the field. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 823 |
Genome length (bp) | 61926 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | College of Southern Nevada |
Annotation Status | In GenBank |
Plaque Notes | Plaque morphology was clear and consistent. Approximately 1.0mm in diameter. |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR613475 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
151 |
Pitt Freezer Box Grid# |
H12 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |