Gordonia phage OlgasClover
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Detailed Information for Phage OlgasClover
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByAmbar Pena Sanchez
Year Found2022
Location FoundLas Vegas, NV USA
Finding InstitutionCollege of Southern Nevada
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates36.12535 N, 115.27746 W Map
Discovery NotesFound phage from a clover field at a park near a memorial site for a woman named Olga. A lot of trees and clovers around the park.
Naming NotesPhage was named after Olga and the clovers around the field.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage823
Genome length (bp)61926
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGCTCT
GC Content51.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDJ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCollege of Southern Nevada
Annotation StatusIn GenBank
Plaque NotesPlaque morphology was clear and consistent. Approximately 1.0mm in diameter.
Number of Genes93
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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OlgasClover_1

OlgasClover_2

OlgasClover_3
(hydrolase)

OlgasClover_4

OlgasClover_5

OlgasClover_6

OlgasClover_7

OlgasClover_8
(head fiber protein)

OlgasClover_9

OlgasClover_10
(hydrolase)

OlgasClover_11

OlgasClover_12
(HNH endonuclease)

OlgasClover_13
(lysin A)

OlgasClover_14
(holin)

OlgasClover_15

OlgasClover_16

OlgasClover_17
(terminase)

OlgasClover_18

OlgasClover_19

OlgasClover_20
(portal protein)

OlgasClover_21

OlgasClover_22
(major capsid and protease fusion protein)

OlgasClover_23

OlgasClover_24
(tail terminator)

OlgasClover_25
(major tail protein)

OlgasClover_26

OlgasClover_27
(major tail protein)

OlgasClover_28

OlgasClover_29

OlgasClover_30
(lysin B)

OlgasClover_31

OlgasClover_32
(tape measure protein)

OlgasClover_33
(minor tail protein)

OlgasClover_34
(minor tail protein)

OlgasClover_35

OlgasClover_36

OlgasClover_37

OlgasClover_38

OlgasClover_39

OlgasClover_40

OlgasClover_41

OlgasClover_42

OlgasClover_43

OlgasClover_44

OlgasClover_45

OlgasClover_46

OlgasClover_47

OlgasClover_48

OlgasClover_49

OlgasClover_50

OlgasClover_51

OlgasClover_52

OlgasClover_53

OlgasClover_54

OlgasClover_55

OlgasClover_56

OlgasClover_57

OlgasClover_58

OlgasClover_59

OlgasClover_60

OlgasClover_61

OlgasClover_62
(DNA primase/polymerase)

OlgasClover_63

OlgasClover_64

OlgasClover_65
(deoxycytidylate deaminase)

OlgasClover_66

OlgasClover_67
(SSB protein)

OlgasClover_68

OlgasClover_69
(ThyX-like thymidylate synthase)

OlgasClover_70

OlgasClover_71

OlgasClover_72

OlgasClover_73

OlgasClover_74

OlgasClover_75

OlgasClover_76

OlgasClover_77

OlgasClover_78

OlgasClover_79

OlgasClover_80

OlgasClover_81

OlgasClover_82

OlgasClover_83

OlgasClover_84

OlgasClover_85

OlgasClover_86

OlgasClover_87

OlgasClover_88
(DNA helicase)

OlgasClover_89
(HNH endonuclease)

OlgasClover_90
(VRR-Nuc domain protein)

OlgasClover_91
(Cas4 exonuclease)

OlgasClover_92
(helix-turn-helix DNA binding domain protein)

OlgasClover_93

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR613475
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 151
Pitt Freezer Box Grid# H12
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload