Gordonia phage PullumCavea
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Detailed Information for Phage PullumCavea
Discovery Information
Isolation HostGordonia terrae 3612
Found ByNaomi Delahoussaye and Madelyn Hall
Year Found2021
Location FoundMonroe, LA USA
Finding InstitutionUniversity of Louisiana at Monroe
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates32.592653 N, 91.975229 W Map
Discovery NotesFound in a soil sample taken from behind a chicken coop during August. The weather was hot and humid and the soil was damp.
Naming NotesThe soil sample with the phage was collected near a chicken coop. PullumCavea is Latin for chicken coop.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage122
Genome length (bp)58535
Character of genome endsCircularly Permuted
GC Content67.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Louisiana at Monroe
Annotation StatusIn GenBank
Plaque NotesSmall clear plaques
Number of Genes92
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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PullumCavea_1
(terminase small subunit)

PullumCavea_2

PullumCavea_3

PullumCavea_4

PullumCavea_5
(terminase large subunit)

PullumCavea_6

PullumCavea_7

PullumCavea_8
(ASC-1 transcription coactivator)

PullumCavea_9

PullumCavea_10
(polynucleotide kinase)

PullumCavea_11

PullumCavea_12
(portal protein)

PullumCavea_13

PullumCavea_14

PullumCavea_15

PullumCavea_16

PullumCavea_17
(RNA ligase)

PullumCavea_18

PullumCavea_19
(major capsid protein)

PullumCavea_20

PullumCavea_21

PullumCavea_22
(major tail protein)

PullumCavea_23
(Head-to-tail adaptor)

PullumCavea_24

PullumCavea_25

PullumCavea_26

PullumCavea_27
(tail assembly chaperone)

PullumCavea_28

PullumCavea_29
(tape measure protein)

PullumCavea_30
(minor tail protein)

PullumCavea_31
(minor tail protein)

PullumCavea_32

PullumCavea_33
(minor tail protein)

PullumCavea_34

PullumCavea_35
(minor tail protein)

PullumCavea_36

PullumCavea_37

PullumCavea_38
(lysin A)

PullumCavea_39
(holin)

PullumCavea_40

PullumCavea_41

PullumCavea_42

PullumCavea_43
(lysin B)

PullumCavea_44
(serine integrase)

PullumCavea_45

PullumCavea_46
(tyrosine integrase)

PullumCavea_47
(immunity repressor)

PullumCavea_48
(HTH DNA binding protein)

PullumCavea_49

PullumCavea_50

PullumCavea_51

PullumCavea_52

PullumCavea_53
(RecE-like exonuclease)

PullumCavea_54
(RecT-like ssDNA binding protein)

PullumCavea_55

PullumCavea_56

PullumCavea_57

PullumCavea_58
(DNA methyltransferase)

PullumCavea_59
(DNA binding protein)

PullumCavea_60

PullumCavea_61

PullumCavea_62
(RuvC-like resolvase)

PullumCavea_63

PullumCavea_64

PullumCavea_65

PullumCavea_66

PullumCavea_67

PullumCavea_68

PullumCavea_69

PullumCavea_70

PullumCavea_71
(PnuC-like nicotinamide riboside transporter)

PullumCavea_72

PullumCavea_73

PullumCavea_74

PullumCavea_75

PullumCavea_76

PullumCavea_77

PullumCavea_78

PullumCavea_79

PullumCavea_80
(DNA methyltransferase)

PullumCavea_81

PullumCavea_82

PullumCavea_83
(HNH endonuclease)

PullumCavea_84
(helix-turn-helix DNA binding protein)

PullumCavea_85

PullumCavea_86

PullumCavea_87

PullumCavea_88

PullumCavea_89

PullumCavea_90

PullumCavea_91

PullumCavea_92

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON970619
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 136
Pitt Freezer Box Grid# H9
Available Files
GenBank File for PhameratorDownload