Detailed Information for Phage ShyRosie |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Cheyenne Dunaway |
Year Found | 2024 |
Location Found | Buckhead Ridge, FL United States of America |
Finding Institution | Indian River State College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 28°C |
GPS Coordinates | 27.146846 N, 80.869065 W Map |
Discovery Notes | Phage was obtained from soil collected from a drainage ditch leading to the Kissimmee River. The soil was moist as it had been raining and the temperature was 87*F outside with 90% humidity. Soil was collected 3cm below the surface of the grass. Organic matter was also collected along with the soil. |
Naming Notes | This phage is named after myself and my grandmother, Rosie. A wonderful, inspirational woman. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 884 |
Genome length (bp) | 54529 |
Character of genome ends | Circularly Permuted |
GC Content | 60.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EK |
Subcluster | EK2 |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | Indian River State College |
Annotation Status | QC Complete |
Morphotype | Siphoviridae |
Number of Genes | 56 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
195 |
Pitt Freezer Box Grid# |
G6 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |