Detailed Information for Phage VanDeWege |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Alexandra VanDeWege |
Year Found | 2016 |
Location Found | Grand Rapids, MI USA |
Finding Institution | Calvin University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 42.929508 N, 85.588933 W Map |
Discovery Notes | Found underneath a squash plant in Calvin College's Campus Gardens. The soil sample was rich, dark, and somewhat moist. There was also some organic matter within the soil sample. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 4, 2017 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 340 |
Genome length (bp) | 58972 |
Character of genome ends | Circularly Permuted |
GC Content | 67.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DC |
Subcluster | DC1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Gettysburg College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 96 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK864264 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
10^8 |
Date of SEA Lysate Titering |
Nov 30, 2016 |
Pitt Freezer Box# |
39 |
Pitt Freezer Box Grid# |
B3 |
Available Files |
GenBank File for Phamerator | Download |