Mycobacterium phage Beem
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Detailed Information for Phage Beem
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByBrandon Martinez
Year Found2019
Location FoundOrangeburg, NY
Finding InstitutionDominican University New York
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates41.0965 N, 73.9729 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 21, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage444
Genome length (bp)113128
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of the Sciences (now St. Joseph's Univ)
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes243
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Beem_1
(terminase large subunit)

Beem_2

Beem_3

Beem_4
(HNH endonuclease)

Beem_5

Beem_6

Beem_7

Beem_8

Beem_9
(terminase small subunit)

Beem_10
(terminase large subunit)

Beem_11

Beem_12
(portal protein)

Beem_13
(capsid maturation protease)

Beem_14
(major capsid protein)

Beem_15
(glycosyltransferase)

Beem_16
(serine/threonine kinase)

Beem_17
(methyltransferase)

Beem_18
(glycosyltransferase)

Beem_19
(glycosyltransferase)

Beem_20
(glycosyltransferase)

Beem_21
(peptidase)

Beem_22
(UDP-glucose dehydrogenase)

Beem_23
(glycosyltransferase)

Beem_24

Beem_25
(head-to-tail adaptor)

Beem_26
(head-to-tail stopper)

Beem_27

Beem_28
(tail terminator)

Beem_29

Beem_30

Beem_31
(major tail protein)

Beem_32
(tail assembly chaperone)

Beem_33
(tail assembly chaperone)

Beem_34
(tape measure protein)

Beem_35
(minor tail protein)

Beem_36
(minor tail protein)

Beem_37
(minor tail protein)

Beem_38
(minor tail protein)

Beem_39
(minor tail protein)

Beem_40
(minor tail protein)

Beem_41

Beem_42

Beem_43
(kinase)

Beem_44

Beem_45

Beem_46

Beem_47
(lysin A)

Beem_48

Beem_49
(lysin B)

Beem_50
(holin)

Beem_51

Beem_52
(thioredoxin)

Beem_53

Beem_54

Beem_55

Beem_56

Beem_57

Beem_58

Beem_59
(Lsr2-like DNA bridging protein)

Beem_60

Beem_61

Beem_62

Beem_63

Beem_64

Beem_65

Beem_66

Beem_67

Beem_68

Beem_69

Beem_70

Beem_71

Beem_72

Beem_73

Beem_74

Beem_75

Beem_76

Beem_77

Beem_78

Beem_79

Beem_80
(excise)

Beem_81
(tyrosine integrase)

Beem_82

Beem_83

Beem_84

Beem_85

Beem_86

Beem_87

Beem_88

Beem_89

Beem_90

Beem_91

Beem_92

Beem_93

Beem_94

Beem_95

Beem_96

Beem_97
(immunity repressor)

Beem_98
(helix-turn-helix DNA binding domain protein)

Beem_99

Beem_100

Beem_101
(esterase)

Beem_102

Beem_103

Beem_104

Beem_105

Beem_106

Beem_107

Beem_108
(HNH endonuclease)

Beem_109

Beem_110

Beem_111

Beem_112

Beem_113

Beem_114

Beem_115

Beem_116

Beem_117

Beem_118

Beem_119
(Cas4 family exonuclease)

Beem_120

Beem_121

Beem_122

Beem_123
(DNA methylase)

Beem_124
(DNA methylase)

Beem_125
(HNH endonuclease)

Beem_126

Beem_127

Beem_128

Beem_129

Beem_130
(polynucleotide kinase)

Beem_131

Beem_132
(endonuclease VII)

Beem_133
(WhiB family transcription factor)

Beem_134
(helix-turn-helix DNA binding domain protein)

Beem_135

Beem_136

Beem_137

Beem_138

Beem_139
(DNA primase/polymerase)

Beem_140

Beem_141

Beem_142

Beem_143

Beem_144

Beem_145

Beem_146
(helix-turn-helix DNA binding domain protein)

Beem_147

Beem_148

Beem_149

Beem_150
(helix-turn-helix DNA binding domain protein)

Beem_151
(HNH endonuclease)

Beem_152

Beem_153

Beem_154

Beem_155
(HNH endonuclease)

Beem_156

Beem_157

Beem_158
(RNA ligase)

Beem_159
(ClpP-like protease)

Beem_160
(DnaQ-like DNA polymerase III subunit)

Beem_161

Beem_162

Beem_163

Beem_164

Beem_165
(nucleotide pyrophosphohydrolase)

Beem_166

Beem_167

Beem_168
(helix-turn-helix DNA binding domain protein)

Beem_169

Beem_170

Beem_171

Beem_172

Beem_173

Beem_174

Beem_175

Beem_176
(metallophosphoesterase)

Beem_177

Beem_178

Beem_179

Beem_180

Beem_181

Beem_182

Beem_183

Beem_184

Beem_185 — tRNA
(tRNA-Gly(tcc))

Beem_186

Beem_187

Beem_188

Beem_189

Beem_190

Beem_191

Beem_192

Beem_193

Beem_194

Beem_195

Beem_196

Beem_197
(Imm-like superinfection immunity protein)

Beem_198

Beem_199

Beem_200
(FtsK-like DNA translocase)

Beem_201

Beem_202

Beem_203

Beem_204
(Ku-like dsDNA break-binding protein)

Beem_205

Beem_206

Beem_207

Beem_208

Beem_209

Beem_210

Beem_211
(helix-turn-helix DNA binding domain protein)

Beem_212

Beem_213

Beem_214

Beem_215

Beem_216

Beem_217

Beem_218

Beem_219

Beem_220

Beem_221

Beem_222

Beem_223

Beem_224

Beem_225

Beem_226

Beem_227

Beem_228

Beem_229

Beem_230

Beem_231

Beem_232

Beem_233

Beem_234

Beem_235

Beem_236

Beem_237

Beem_238

Beem_239

Beem_240

Beem_241

Beem_242

Beem_243

Beem_244

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ622169
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 116
Pitt Freezer Box Grid# D8
Available Files
GenBank File for PhameratorDownload