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Mycobacterium phage NihilNomen
NihilNomen Plaque Picture
NihilNomen EM Picture
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Detailed Information for Phage NihilNomen
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAstha Mehta, Ryan Doss
Year Found2018
Location FoundLas Vegas, NV USA
Finding InstitutionUniversity of Nevada Las Vegas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates36.113974 N, 115.144462 W Map
Discovery NotesSoil sample taken from plot 28 at UNLV community gardens. The soil sample was taken from 6 cm below surface. There was heavy moisture levels and dark soil color present that day.
Naming NotesThe original name of the phage was NoName because we could not come up with a name. However, NoName was taken and so we choose to change NoName to latin. Therefore, the phage was named NihilNomen.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage897
Genome length (bp)110439
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Nevada Las Vegas
Annotation StatusIn GenBank
Plaque NotesThe plaques vary from 0.5mm up to 2mm in size. There also seems to be a partial clearing of 2-4 mm extra. Thus, making the phages lysogenic.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

NihilNomen_1
(HNH endonuclease)

NihilNomen_2
(terminase)

NihilNomen_3

NihilNomen_4
(HNH endonuclease)

NihilNomen_5

NihilNomen_6

NihilNomen_7

NihilNomen_8
(terminase small subunit)

NihilNomen_9
(terminase large subunit)

NihilNomen_10

NihilNomen_11
(portal protein)

NihilNomen_12
(capsid maturation protease)

NihilNomen_13
(major capsid protein)

NihilNomen_14
(glycosyltransferase)

NihilNomen_15
(serine/threonine kinase)

NihilNomen_16
(methyltransferase)

NihilNomen_17
(glycosyltransferase)

NihilNomen_18
(glycosyltransferase)

NihilNomen_19
(glycosyltransferase)

NihilNomen_20

NihilNomen_21
(UDP-glucose dehydrogenase)

NihilNomen_22
(glycosyltransferase)

NihilNomen_23

NihilNomen_24
(head-to-tail adaptor)

NihilNomen_25
(head-to-tail stopper)

NihilNomen_26

NihilNomen_27
(tail terminator)

NihilNomen_28

NihilNomen_29

NihilNomen_30
(major tail protein)

NihilNomen_31
(tail assembly chaperone)

NihilNomen_32
(tail assembly chaperone)

NihilNomen_33
(tape measure protein)

NihilNomen_34
(minor tail protein)

NihilNomen_35
(minor tail protein)

NihilNomen_36
(minor tail protein)

NihilNomen_37
(minor tail protein)

NihilNomen_38
(minor tail protein)

NihilNomen_39
(minor tail protein)

NihilNomen_40

NihilNomen_41
(hydrolase)

NihilNomen_42

NihilNomen_43

NihilNomen_44

NihilNomen_45

NihilNomen_46
(lysin A)

NihilNomen_47

NihilNomen_48
(lysin B)

NihilNomen_49
(holin)

NihilNomen_50

NihilNomen_51
(NrdH-like glutaredoxin)

NihilNomen_52

NihilNomen_53

NihilNomen_54

NihilNomen_55

NihilNomen_56

NihilNomen_57

NihilNomen_58
(Lsr2-like DNA bridging protein)

NihilNomen_59

NihilNomen_60

NihilNomen_61

NihilNomen_62

NihilNomen_63

NihilNomen_64

NihilNomen_65

NihilNomen_66

NihilNomen_67

NihilNomen_68

NihilNomen_69

NihilNomen_70

NihilNomen_71

NihilNomen_72

NihilNomen_73

NihilNomen_74

NihilNomen_75

NihilNomen_76

NihilNomen_77

NihilNomen_78

NihilNomen_79

NihilNomen_80

NihilNomen_81
(excise)

NihilNomen_82
(integrase)

NihilNomen_83

NihilNomen_84

NihilNomen_85

NihilNomen_86

NihilNomen_87

NihilNomen_88

NihilNomen_89

NihilNomen_90

NihilNomen_91

NihilNomen_92

NihilNomen_93

NihilNomen_94

NihilNomen_95

NihilNomen_96

NihilNomen_97

NihilNomen_98
(immunity repressor)

NihilNomen_99
(Cro protein)

NihilNomen_100

NihilNomen_101

NihilNomen_102
(LipC-like lipase)

NihilNomen_103

NihilNomen_104

NihilNomen_105

NihilNomen_106

NihilNomen_107

NihilNomen_108
(HNH endonuclease)

NihilNomen_109

NihilNomen_110

NihilNomen_111

NihilNomen_112

NihilNomen_113

NihilNomen_114

NihilNomen_115

NihilNomen_116

NihilNomen_117

NihilNomen_118

NihilNomen_119
(AddA-like dsDNA break-binding protein)

NihilNomen_120

NihilNomen_121

NihilNomen_122

NihilNomen_123
(methyltransferase)

NihilNomen_124
(methyltransferase)

NihilNomen_125
(HNH endonuclease)

NihilNomen_126

NihilNomen_127

NihilNomen_128

NihilNomen_129

NihilNomen_130
(polynucleotide kinase)

NihilNomen_131

NihilNomen_132
(endonuclease VII)

NihilNomen_133
(WhiB family transcription factor)

NihilNomen_134
(helix-turn-helix DNA binding domain protein)

NihilNomen_135

NihilNomen_136

NihilNomen_137

NihilNomen_138

NihilNomen_139
(DNA primase/polymerase)

NihilNomen_140

NihilNomen_141

NihilNomen_142

NihilNomen_143

NihilNomen_144
(helix-turn-helix DNA binding domain protein)

NihilNomen_145

NihilNomen_146
(helix-turn-helix DNA binding domain protein)

NihilNomen_147

NihilNomen_148

NihilNomen_149

NihilNomen_150
(RepA-like helicase)

NihilNomen_151

NihilNomen_152

NihilNomen_153

NihilNomen_154

NihilNomen_155
(HNH endonuclease)

NihilNomen_156

NihilNomen_157

NihilNomen_158

NihilNomen_159
(RNA ligase)

NihilNomen_160
(ClpP protease)

NihilNomen_161
(DNA polymerase III subunit)

NihilNomen_162

NihilNomen_163

NihilNomen_164

NihilNomen_165

NihilNomen_166
(MazG-like nucleotide pyrophosphohydrolase)

NihilNomen_167

NihilNomen_168

NihilNomen_169
(MRE11 double-strand break endo/exonuclease)

NihilNomen_170

NihilNomen_171

NihilNomen_172

NihilNomen_173

NihilNomen_174

NihilNomen_175

NihilNomen_176

NihilNomen_177
(metallophosphoesterase)

NihilNomen_178

NihilNomen_179

NihilNomen_180

NihilNomen_181

NihilNomen_182

NihilNomen_183

NihilNomen_184

NihilNomen_186

NihilNomen_187

NihilNomen_188

NihilNomen_189

NihilNomen_190

NihilNomen_191

NihilNomen_192

NihilNomen_193

NihilNomen_194

NihilNomen_195

NihilNomen_196

NihilNomen_197
(membrane protein)

NihilNomen_198

NihilNomen_199

NihilNomen_200
(FtsK-like DNA translocase)

NihilNomen_201

NihilNomen_202

NihilNomen_203

NihilNomen_204

NihilNomen_205

NihilNomen_206
(Ku-like dsDNA break-binding protein)

NihilNomen_207

NihilNomen_208

NihilNomen_209

NihilNomen_210

NihilNomen_211

NihilNomen_212
(helix-turn-helix DNA binding domain protein)

NihilNomen_213

NihilNomen_214

NihilNomen_215

NihilNomen_216

NihilNomen_217

NihilNomen_218

NihilNomen_219

NihilNomen_220

NihilNomen_221

NihilNomen_222

NihilNomen_223

NihilNomen_224

NihilNomen_225

NihilNomen_226

NihilNomen_227

NihilNomen_228

NihilNomen_229

NihilNomen_230

NihilNomen_231

NihilNomen_232

NihilNomen_233

NihilNomen_234

NihilNomen_235

NihilNomen_236

NihilNomen_237

NihilNomen_238

NihilNomen_239

NihilNomen_240

NihilNomen_241

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967402
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 78
Pitt Freezer Box Grid# B6
Available Files
GenBank File for PhameratorDownload