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Mycobacterium phage ThreeRngTarjay
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Detailed Information for Phage ThreeRngTarjay
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlex Jackman and Nour El Yaman
Year Found2016
Location FoundDetroit, MI USA
Finding InstitutionUniversity of Detroit Mercy
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates42.414 N, 83.137982 W Map
Discovery NotesThis phage was discovered in a flowerbed filled with mulch in front of Shiple Hall on the University of Detroit Mercy campus.
Naming NotesThe original name of this phage was Three Ring Target. It was named this because the phage reliably forms plaques that have three distinct rings of bacteria that have not been lysed, around a center of lytic phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 27, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage350
Genome length (bp)113254
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content61.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Detroit Mercy
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

ThreeRngTarjay_1
(HNH endonuclease)

ThreeRngTarjay_2

ThreeRngTarjay_3

ThreeRngTarjay_4

ThreeRngTarjay_5

ThreeRngTarjay_6

ThreeRngTarjay_7

ThreeRngTarjay_8

ThreeRngTarjay_9
(terminase large subunit)

ThreeRngTarjay_10

ThreeRngTarjay_11
(portal protein)

ThreeRngTarjay_12
(capsid maturation protease)

ThreeRngTarjay_13
(major capsid protein)

ThreeRngTarjay_14

ThreeRngTarjay_15
(serine/threonine protein kinase)

ThreeRngTarjay_16
(methyltransferase)

ThreeRngTarjay_17
(glycosyltransferase)

ThreeRngTarjay_18
(glycosyltransferase)

ThreeRngTarjay_19
(glycosyltransferase)

ThreeRngTarjay_20

ThreeRngTarjay_21

ThreeRngTarjay_22
(glycosyltransferase)

ThreeRngTarjay_23

ThreeRngTarjay_24
(head-to-tail adaptor)

ThreeRngTarjay_25
(head-to-tail stopper)

ThreeRngTarjay_26

ThreeRngTarjay_27
(tail terminator)

ThreeRngTarjay_28

ThreeRngTarjay_29

ThreeRngTarjay_30
(major tail protein)

ThreeRngTarjay_31
(tail assembly chaperone)

ThreeRngTarjay_32
(tail assembly chaperone)

ThreeRngTarjay_33
(tape measure protein)

ThreeRngTarjay_34
(minor tail protein)

ThreeRngTarjay_35
(minor tail protein)

ThreeRngTarjay_36
(minor tail protein)

ThreeRngTarjay_37
(minor tail protein)

ThreeRngTarjay_38
(minor tail protein)

ThreeRngTarjay_39

ThreeRngTarjay_40

ThreeRngTarjay_41

ThreeRngTarjay_42

ThreeRngTarjay_43

ThreeRngTarjay_44

ThreeRngTarjay_45
(lysin A)

ThreeRngTarjay_46

ThreeRngTarjay_47
(lysin B)

ThreeRngTarjay_48
(holin)

ThreeRngTarjay_49

ThreeRngTarjay_50
(thioredoxin)

ThreeRngTarjay_51

ThreeRngTarjay_52

ThreeRngTarjay_53

ThreeRngTarjay_54

ThreeRngTarjay_55

ThreeRngTarjay_56

ThreeRngTarjay_57
(Lsr2-like DNA bridging protein)

ThreeRngTarjay_58

ThreeRngTarjay_59

ThreeRngTarjay_60

ThreeRngTarjay_61

ThreeRngTarjay_62

ThreeRngTarjay_63

ThreeRngTarjay_64

ThreeRngTarjay_65

ThreeRngTarjay_66

ThreeRngTarjay_67

ThreeRngTarjay_68

ThreeRngTarjay_69

ThreeRngTarjay_70

ThreeRngTarjay_71

ThreeRngTarjay_72

ThreeRngTarjay_73

ThreeRngTarjay_74

ThreeRngTarjay_75

ThreeRngTarjay_76

ThreeRngTarjay_77

ThreeRngTarjay_78

ThreeRngTarjay_79
(integrase)

ThreeRngTarjay_80

ThreeRngTarjay_81

ThreeRngTarjay_82

ThreeRngTarjay_83

ThreeRngTarjay_84

ThreeRngTarjay_85

ThreeRngTarjay_86

ThreeRngTarjay_87

ThreeRngTarjay_88

ThreeRngTarjay_89

ThreeRngTarjay_90

ThreeRngTarjay_91

ThreeRngTarjay_92

ThreeRngTarjay_93
(immunity repressor)

ThreeRngTarjay_94
(helix-turn-helix DNA binding domain protein)

ThreeRngTarjay_95

ThreeRngTarjay_96

ThreeRngTarjay_97
(LipC-like lipase)

ThreeRngTarjay_98

ThreeRngTarjay_99

ThreeRngTarjay_100

ThreeRngTarjay_101

ThreeRngTarjay_102

ThreeRngTarjay_103

ThreeRngTarjay_104

ThreeRngTarjay_105

ThreeRngTarjay_106

ThreeRngTarjay_107

ThreeRngTarjay_108

ThreeRngTarjay_109
(HNH endonuclease)

ThreeRngTarjay_110

ThreeRngTarjay_111

ThreeRngTarjay_112

ThreeRngTarjay_113

ThreeRngTarjay_114
(AddA-like dsDNA break-binding protein)

ThreeRngTarjay_115

ThreeRngTarjay_116

ThreeRngTarjay_117
(DNA methylase)

ThreeRngTarjay_118
(HNH endonuclease)

ThreeRngTarjay_119

ThreeRngTarjay_120

ThreeRngTarjay_121

ThreeRngTarjay_122

ThreeRngTarjay_123

ThreeRngTarjay_124
(polynucleotide kinase)

ThreeRngTarjay_125

ThreeRngTarjay_126
(endonuclease VII)

ThreeRngTarjay_127
(WhiB family transcription factor)

ThreeRngTarjay_128
(helix-turn-helix DNA binding domain protein)

ThreeRngTarjay_129

ThreeRngTarjay_130

ThreeRngTarjay_131

ThreeRngTarjay_132
(DNA primase/polymerase)

ThreeRngTarjay_133

ThreeRngTarjay_134

ThreeRngTarjay_135

ThreeRngTarjay_136

ThreeRngTarjay_137

ThreeRngTarjay_138

ThreeRngTarjay_139

ThreeRngTarjay_140

ThreeRngTarjay_141

ThreeRngTarjay_142

ThreeRngTarjay_143
(DnaB-like helicase)

ThreeRngTarjay_144
(HNH endonuclease)

ThreeRngTarjay_145

ThreeRngTarjay_146

ThreeRngTarjay_147

ThreeRngTarjay_148

ThreeRngTarjay_149

ThreeRngTarjay_150

ThreeRngTarjay_151

ThreeRngTarjay_152

ThreeRngTarjay_153

ThreeRngTarjay_154

ThreeRngTarjay_155

ThreeRngTarjay_156

ThreeRngTarjay_157

ThreeRngTarjay_158

ThreeRngTarjay_159

ThreeRngTarjay_160

ThreeRngTarjay_161

ThreeRngTarjay_162

ThreeRngTarjay_163

ThreeRngTarjay_164

ThreeRngTarjay_165

ThreeRngTarjay_166

ThreeRngTarjay_167

ThreeRngTarjay_168

ThreeRngTarjay_169

ThreeRngTarjay_170

ThreeRngTarjay_171

ThreeRngTarjay_172

ThreeRngTarjay_173
(metallophosphoesterase)

ThreeRngTarjay_174

ThreeRngTarjay_175

ThreeRngTarjay_176

ThreeRngTarjay_177

ThreeRngTarjay_178

ThreeRngTarjay_179

ThreeRngTarjay_180

ThreeRngTarjay_182

ThreeRngTarjay_183

ThreeRngTarjay_184

ThreeRngTarjay_185

ThreeRngTarjay_186

ThreeRngTarjay_187

ThreeRngTarjay_188

ThreeRngTarjay_189

ThreeRngTarjay_190

ThreeRngTarjay_191

ThreeRngTarjay_192

ThreeRngTarjay_193

ThreeRngTarjay_194

ThreeRngTarjay_195

ThreeRngTarjay_196

ThreeRngTarjay_197

ThreeRngTarjay_198
(FtsK-like DNA translocase)

ThreeRngTarjay_199

ThreeRngTarjay_200

ThreeRngTarjay_201

ThreeRngTarjay_202
(Ku-like dsDNA break-binding protein)

ThreeRngTarjay_203

ThreeRngTarjay_204

ThreeRngTarjay_205

ThreeRngTarjay_206

ThreeRngTarjay_207

ThreeRngTarjay_208

ThreeRngTarjay_209
(helix-turn-helix DNA binding domain protein)

ThreeRngTarjay_210

ThreeRngTarjay_211

ThreeRngTarjay_212

ThreeRngTarjay_213

ThreeRngTarjay_214

ThreeRngTarjay_215

ThreeRngTarjay_216

ThreeRngTarjay_217

ThreeRngTarjay_218

ThreeRngTarjay_219

ThreeRngTarjay_220

ThreeRngTarjay_221

ThreeRngTarjay_222

ThreeRngTarjay_223

ThreeRngTarjay_224

ThreeRngTarjay_225

ThreeRngTarjay_226

ThreeRngTarjay_227

ThreeRngTarjay_228

ThreeRngTarjay_229

ThreeRngTarjay_230

ThreeRngTarjay_231

ThreeRngTarjay_232

ThreeRngTarjay_233

ThreeRngTarjay_234

ThreeRngTarjay_235

ThreeRngTarjay_236

ThreeRngTarjay_237

ThreeRngTarjay_238

ThreeRngTarjay_239

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK524527
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.5*10^(9)
Date of SEA Lysate Titering Nov 15, 2016
Pitt Freezer Box# 45
Pitt Freezer Box Grid# B6
Available Files
GenBank File for PhameratorDownload