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Mycobacterium phage HokkenD
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Detailed Information for Phage HokkenD
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAvery Roe
Year Found2015
Location FoundLawrence, KS USA
Finding InstitutionUniversity of Kansas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.951944 N, 95.259444 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 12, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage356
Genome length (bp)113067
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

HokkenD_1
(HNH endonuclease)

HokkenD_2
(terminase, small subunit)

HokkenD_3

HokkenD_4
(HNH endonuclease)

HokkenD_5
(terminase, large subunit)

HokkenD_6

HokkenD_7
(portal protein)

HokkenD_8
(capsid maturation protease)

HokkenD_9
(major capsid protein)

HokkenD_10
(glycosyltransferase)

HokkenD_11
(serine/threonine kinase)

HokkenD_12
(methyltransferase)

HokkenD_13
(glycosyltransferase)

HokkenD_14
(glycosyltransferase)

HokkenD_15
(glycosyltransferase)

HokkenD_16

HokkenD_17

HokkenD_18
(glycosyltransferase)

HokkenD_19

HokkenD_20
(head-to-tail adaptor)

HokkenD_21
(head-to-tail adaptor)

HokkenD_22

HokkenD_23
(head-to-tail adaptor)

HokkenD_24

HokkenD_25

HokkenD_26
(major tail protein)

HokkenD_27
(tail assembly chaperone)

HokkenD_28
(tail assembly chaperone)

HokkenD_29
(tape measure protein)

HokkenD_30
(minor tail protein)

HokkenD_31
(minor tail protein)

HokkenD_32
(minor tail protein)

HokkenD_33
(minor tail protein)

HokkenD_34
(minor tail protein)

HokkenD_35
(minor tail protein, D-ala-D-ala carboxypeptidase)

HokkenD_36

HokkenD_37

HokkenD_38

HokkenD_39

HokkenD_40
(lysin A)

HokkenD_41

HokkenD_42
(lysin B)

HokkenD_43
(holin)

HokkenD_44

HokkenD_45
(NrdH-like glutaredoxin)

HokkenD_46

HokkenD_47

HokkenD_48

HokkenD_49

HokkenD_50

HokkenD_51

HokkenD_52
(Lsr2-like DNA bridging protein)

HokkenD_53

HokkenD_54

HokkenD_55

HokkenD_56

HokkenD_57

HokkenD_58

HokkenD_59

HokkenD_60

HokkenD_61

HokkenD_62

HokkenD_63

HokkenD_64

HokkenD_65

HokkenD_66

HokkenD_67

HokkenD_68

HokkenD_69

HokkenD_70

HokkenD_71

HokkenD_72
(excise)

HokkenD_73
(tyrosine integrase)

HokkenD_74

HokkenD_75

HokkenD_76

HokkenD_77

HokkenD_78

HokkenD_79

HokkenD_80

HokkenD_81

HokkenD_82

HokkenD_83

HokkenD_84
(membrane protein)

HokkenD_85

HokkenD_86
(helix-turn-helix DNA binding domain)

HokkenD_87

HokkenD_88

HokkenD_89
(lipase, LipC-like)

HokkenD_90

HokkenD_91

HokkenD_92

HokkenD_93

HokkenD_94

HokkenD_95

HokkenD_96
(HNH endonuclease)

HokkenD_97

HokkenD_98

HokkenD_99

HokkenD_100

HokkenD_101

HokkenD_102

HokkenD_103

HokkenD_104

HokkenD_105

HokkenD_106

HokkenD_107
(dsDNA break-binding protein, AddA-like)

HokkenD_108

HokkenD_109

HokkenD_110

HokkenD_111
(DNA methylase)

HokkenD_112
(DNA methylase)

HokkenD_113
(HNH endonuclease)

HokkenD_114

HokkenD_115

HokkenD_116

HokkenD_117

HokkenD_118
(polynucleotide kinase)

HokkenD_119

HokkenD_120
(endonuclease VII)

HokkenD_121
(WhiB family transcription factor)

HokkenD_122
(helix-turn-helix DNA binding domain)

HokkenD_123

HokkenD_124

HokkenD_125

HokkenD_126

HokkenD_127

HokkenD_128

HokkenD_129
(DNA primase/polymerase)

HokkenD_130

HokkenD_131

HokkenD_132

HokkenD_133

HokkenD_134

HokkenD_135

HokkenD_136

HokkenD_137
(helix-turn-helix DNA binding domain)

HokkenD_138

HokkenD_139

HokkenD_140

HokkenD_141
(DNA helicase)

HokkenD_142
(HNH endonuclease)

HokkenD_143
(methyltransferase)

HokkenD_144

HokkenD_145

HokkenD_146

HokkenD_147
(HNH endonuclease)

HokkenD_148

HokkenD_149

HokkenD_150

HokkenD_151

HokkenD_152
(RNA ligase)

HokkenD_153
(ClpP-like protease)

HokkenD_154
(DnaQ-like (DNA polymerase III subunit))

HokkenD_155

HokkenD_156

HokkenD_157

HokkenD_158

HokkenD_159
(MazG-like nucleotide pyrophosphohydrolase)

HokkenD_160

HokkenD_161

HokkenD_162
(metallophosphoesterase)

HokkenD_163

HokkenD_164

HokkenD_165

HokkenD_166

HokkenD_167

HokkenD_168

HokkenD_169

HokkenD_170
(metallophosphoesterase)

HokkenD_171

HokkenD_172

HokkenD_173

HokkenD_174

HokkenD_175

HokkenD_176

HokkenD_178

HokkenD_179

HokkenD_180
(histidine triad nucleotide binding protein)

HokkenD_181

HokkenD_182

HokkenD_183

HokkenD_184

HokkenD_185

HokkenD_186

HokkenD_187

HokkenD_188

HokkenD_189

HokkenD_190

HokkenD_191

HokkenD_192
(FtsK-like DNA translocase)

HokkenD_193

HokkenD_194

HokkenD_195

HokkenD_196

HokkenD_197
(Ku-like dsDNA break-binding protein)

HokkenD_198

HokkenD_199

HokkenD_200

HokkenD_201

HokkenD_202

HokkenD_203

HokkenD_204
(helix-turn-helix DNA binding domain)

HokkenD_205

HokkenD_206

HokkenD_207

HokkenD_208

HokkenD_209

HokkenD_210

HokkenD_211

HokkenD_212

HokkenD_213

HokkenD_214

HokkenD_215

HokkenD_216

HokkenD_217

HokkenD_218

HokkenD_219

HokkenD_220

HokkenD_221

HokkenD_222

HokkenD_223

HokkenD_224

HokkenD_225

HokkenD_226

HokkenD_227

HokkenD_228

HokkenD_229

HokkenD_230

HokkenD_231

HokkenD_232

HokkenD_233

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967379
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 9.5 x 10^9
Date of SEA Lysate Titering Nov 1, 2015
Pitt Freezer Box# 18
Pitt Freezer Box Grid# F1
Available Files
GenBank File for PhameratorDownload