Mycobacterium phage Squint
Squint Plaque Picture
Squint EM Picture
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Squint
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlecia
Year Found2016
Location FoundEl Paso, IL USA
Finding InstitutionIllinois Wesleyan University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.732306 N, 89.016778 W Map
Discovery NotesVery small plaques, found near the edge of a pond
Naming NotesWhen I first discovered this phage, the plaques were very tiny. I had to look very carefully.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1792
Genome length (bp)110240
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content61.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPin prick sized plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Squint_1
(HNH endonuclease)

Squint_2

Squint_3

Squint_4

Squint_5
(HNH endonuclease)

Squint_6

Squint_7

Squint_8

Squint_9
(terminase small subunit)

Squint_10
(terminase large subunit)

Squint_11

Squint_12
(portal protein)

Squint_13
(capsid maturation protease)

Squint_14
(major capsid protein)

Squint_15
(glycosyltransferase)

Squint_16
(serine/threonine kinase)

Squint_17
(methyltransferase/glycosyltransferase)

Squint_18
(glycosyltransferase)

Squint_19

Squint_20
(glycosyltransferase)

Squint_21

Squint_22
(head-to-tail adaptor)

Squint_23
(head-to-tail stopper)

Squint_24

Squint_25
(tail terminator)

Squint_26

Squint_27

Squint_28
(major tail protein)

Squint_29
(tail assembly chaperone)

Squint_30
(tail assembly chaperone)

Squint_31
(tape measure protein)

Squint_32
(minor tail protein)

Squint_33
(minor tail protein)

Squint_34
(minor tail protein)

Squint_35
(minor tail protein)

Squint_36
(minor tail protein)

Squint_37
(minor tail protein)

Squint_38

Squint_39

Squint_40

Squint_41

Squint_42

Squint_43

Squint_44

Squint_45
(HNH endonuclease)

Squint_46
(lysin A)

Squint_47
(lysin B)

Squint_48
(holin)

Squint_49

Squint_50
(glutaredoxin)

Squint_51

Squint_52

Squint_53

Squint_54

Squint_55

Squint_56
(DNA bridging protein)

Squint_57

Squint_58

Squint_59

Squint_60

Squint_61

Squint_62

Squint_63

Squint_64

Squint_65

Squint_66

Squint_67

Squint_68

Squint_69

Squint_70

Squint_71

Squint_72

Squint_73

Squint_74

Squint_75

Squint_76

Squint_77

Squint_78

Squint_79

Squint_80

Squint_81

Squint_82

Squint_83

Squint_84

Squint_85

Squint_86
(excise)

Squint_87
(integrase)

Squint_88

Squint_89
(membrane protein)

Squint_90

Squint_91
(helix-turn-helix DNA binding domain protein)

Squint_92

Squint_93

Squint_94
(LipC-like lipase)

Squint_95

Squint_96

Squint_97

Squint_98

Squint_99

Squint_100

Squint_101

Squint_102

Squint_103

Squint_104

Squint_105

Squint_106

Squint_107

Squint_108

Squint_109

Squint_110
(dsDNA break-binding protein)

Squint_111

Squint_112

Squint_113

Squint_114
(HNH endonuclease)

Squint_115
(DNA methylase)

Squint_116
(HNH endonuclease)

Squint_117

Squint_118

Squint_119

Squint_120

Squint_121

Squint_122

Squint_123
(polynucleotide kinase)

Squint_124

Squint_125
(endonuclease VII)

Squint_126
(HNH endonuclease)

Squint_127
(WhiB family transcription factor)

Squint_128
(helix-turn-helix DNA binding domain protein)

Squint_129

Squint_130

Squint_131

Squint_132

Squint_133

Squint_134
(DNA primase/polymerase)

Squint_135

Squint_136

Squint_137

Squint_138

Squint_139

Squint_140
(DNA helicase)

Squint_141

Squint_142

Squint_143
(metallophosphoesterase)

Squint_144
(HNH endonuclease)

Squint_145

Squint_146

Squint_147

Squint_148
(RNA ligase)

Squint_149
(protease)

Squint_150
(helix-turn-helix DNA binding domain protein)

Squint_151
(DNA polymerase III subunit)

Squint_152

Squint_153

Squint_154

Squint_155

Squint_156
(phosphoadenosine phosphosulfate reductase)

Squint_157

Squint_158

Squint_159
(nucleotide pyrophosphohydrolase)

Squint_160
(endonuclease VII)

Squint_161

Squint_162

Squint_163

Squint_164

Squint_165

Squint_166

Squint_167

Squint_168

Squint_169

Squint_170

Squint_171

Squint_172

Squint_173

Squint_174

Squint_175

Squint_176

Squint_177

Squint_178

Squint_179

Squint_180

Squint_181

Squint_182

Squint_184

Squint_185

Squint_186

Squint_187

Squint_188
(helix-turn-helix DNA binding domain protein)

Squint_189

Squint_190

Squint_191

Squint_192
(immunity protein)

Squint_193

Squint_194

Squint_195
(DNA translocase)

Squint_196

Squint_197

Squint_198

Squint_199

Squint_200
(dsDNA break-binding protein)

Squint_201

Squint_202

Squint_203

Squint_204

Squint_205

Squint_206

Squint_207

Squint_208

Squint_209

Squint_210

Squint_211

Squint_212

Squint_213

Squint_214

Squint_215

Squint_216

Squint_217

Squint_218

Squint_219

Squint_220

Squint_221

Squint_222

Squint_223

Squint_224

Squint_225

Squint_226

Squint_227

Squint_228

Squint_229

Squint_230

Squint_231

Squint_232

Squint_233

Squint_234

Squint_235

Squint_236

Squint_237

Squint_238

Squint_239

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF668284
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.75x10^10 pfu/mL
Date of SEA Lysate Titering Oct 11, 2016
Pitt Freezer Box# 32
Pitt Freezer Box Grid# C2
Available Files
GenBank File for PhameratorDownload