Mycobacterium phage Minerva

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Detailed Information for Phage Minerva
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByHalle Grove
Year Found2012
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesMinerva was found by using direct plating.
Naming NotesThe name Minerva was inspired by a character in J.K. Rowling's series, Harry Potter.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 5, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage900
Sanger Finishing Reactions22
Genome length (bp)109871
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.7%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Minerva_1
(HNH endonuclease)

Minerva_2
(terminase small subunit)

Minerva_3
(terminase large subunit)

Minerva_4

Minerva_5

Minerva_6

Minerva_7

Minerva_8

Minerva_9
(terminase large subunit)

Minerva_10

Minerva_11
(portal protein)

Minerva_12
(capsid maturation protease)

Minerva_13
(major capsid protein)

Minerva_14
(glycosyltransferase)

Minerva_15
(protein kinase)

Minerva_16
(methyltransferase)

Minerva_17
(glycosyltransferase)

Minerva_18
(head-to-tail connector)

Minerva_19
(head-to-tail connector)

Minerva_20
(head-to-tail connector)

Minerva_21
(head-to-tail connector)

Minerva_22

Minerva_23

Minerva_24

Minerva_25
(head-to-tail adaptor)

Minerva_26
(head-to-tail stopper)

Minerva_27

Minerva_28
(tail terminator)

Minerva_29

Minerva_30

Minerva_31
(major tail subunit)

Minerva_32
(tail assembly chaperone)

Minerva_33
(tail assembly chaperone)

Minerva_34
(tapemeasure)

Minerva_35
(endonuclease VII)

Minerva_36
(minor tail protein)

Minerva_37
(minor tail protein)

Minerva_38
(minor tail protein)

Minerva_39
(minor tail protein)

Minerva_40
(minor tail protein)

Minerva_41
(minor tail protein)

Minerva_42
(minor tail protein)

Minerva_43

Minerva_44
(minor tail protein)

Minerva_45
(minor tail protein)

Minerva_46

Minerva_47

Minerva_48

Minerva_49

Minerva_50
(LamG domain protein)

Minerva_51

Minerva_52
(HNH endonuclease)

Minerva_53
(lysin A)

Minerva_54

Minerva_55
(lysin B)

Minerva_56
(holin)

Minerva_57

Minerva_58
(NrdH)

Minerva_59

Minerva_60

Minerva_61

Minerva_62

Minerva_63

Minerva_64

Minerva_65
(Lsr2 protein)

Minerva_66

Minerva_67

Minerva_68

Minerva_69

Minerva_70

Minerva_71

Minerva_72

Minerva_73

Minerva_74

Minerva_75

Minerva_76

Minerva_77

Minerva_78

Minerva_79

Minerva_80

Minerva_81

Minerva_82

Minerva_83

Minerva_84
(integrase)

Minerva_85

Minerva_86
(endonuclease VII)

Minerva_87

Minerva_88

Minerva_89

Minerva_90

Minerva_91

Minerva_92

Minerva_93

Minerva_94

Minerva_95

Minerva_96

Minerva_97

Minerva_98

Minerva_99

Minerva_100
(LipC-like esterase)

Minerva_101

Minerva_102

Minerva_103

Minerva_104

Minerva_105

Minerva_106
(HNH endonuclease)

Minerva_107

Minerva_108

Minerva_109

Minerva_110

Minerva_111

Minerva_112

Minerva_113

Minerva_114

Minerva_115
(AddA-like protein)

Minerva_116

Minerva_117

Minerva_118

Minerva_119
(DNA methylase)

Minerva_120
(HNH endonuclease)

Minerva_121

Minerva_122

Minerva_123

Minerva_124

Minerva_125

Minerva_126
(polynucleotide kinase)

Minerva_127

Minerva_128

Minerva_129
(endonuclease VII)

Minerva_130
(WhiB)

Minerva_131
(HTH DNA binding protein)

Minerva_132
(HTH DNA binding protein)

Minerva_133

Minerva_134

Minerva_135

Minerva_136
(DNA primase/polymerase)

Minerva_137
(HNH endonuclease)

Minerva_138

Minerva_139

Minerva_140

Minerva_141

Minerva_142
(HTH DNA binding domain protein)

Minerva_143

Minerva_144
(HTH DNA binding domain protein)

Minerva_145

Minerva_146

Minerva_147
(helicase)

Minerva_148
(HNH endonuclease)

Minerva_149

Minerva_150

Minerva_151

Minerva_152

Minerva_153
(HNH endonuclease)

Minerva_154

Minerva_155

Minerva_156
(RNA ligase)

Minerva_157
(ClpP protease)

Minerva_158
(exonuclease)

Minerva_159

Minerva_160

Minerva_161

Minerva_162
(HNH endonuclease)

Minerva_163

Minerva_164
(MazG-like pyrophosophydrolase)

Minerva_165

Minerva_166

Minerva_167
(metallophosphatase)

Minerva_168

Minerva_169

Minerva_170

Minerva_171

Minerva_172

Minerva_173

Minerva_174

Minerva_175
(metallophosphoesterase)

Minerva_176

Minerva_177

Minerva_178

Minerva_179

Minerva_180

Minerva_181

Minerva_182

Minerva_183

Minerva_185

Minerva_186

Minerva_187
(HIT domain protein)

Minerva_188

Minerva_189

Minerva_190

Minerva_191

Minerva_192

Minerva_193

Minerva_194

Minerva_195

Minerva_196

Minerva_197

Minerva_198

Minerva_199
(FtsK)

Minerva_200

Minerva_201

Minerva_202
(Ku protein)

Minerva_203

Minerva_204

Minerva_205

Minerva_206

Minerva_207

Minerva_208

Minerva_209

Minerva_210

Minerva_211

Minerva_212

Minerva_213

Minerva_214

Minerva_215

Minerva_216

Minerva_217

Minerva_218

Minerva_219

Minerva_220

Minerva_221

Minerva_222

Minerva_223

Minerva_224

Minerva_225

Minerva_226

Minerva_227

Minerva_228

Minerva_229

Minerva_230

Minerva_231

Minerva_232

Minerva_233

Minerva_234

Minerva_235

Minerva_236

Minerva_237

Minerva_238

Minerva_239

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKM101123
Refseq NumberNC_026584
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload